RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NAA25Q14CX7 972 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 TTLL9Q3SXZ7 439 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 HP1BP3Q5SSJ5 553 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 RBM20Q5T481 1227 aaKnown RBP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 IRAK1BP1Q5VVH5 260 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 AGTRAPQ6RW13 159 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 LANCL3Q6ZV70 420 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 UBE2R2Q712K3 238 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 ADCK2Q7Z695 626 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 OR51Q1Q8NH59 317 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 ACTRT1Q8TDG2 376 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 RERGQ96A58 199 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 PBKQ96KB5 322 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 OR4K3Q96R72 315 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 OSBPL9Q96SU4 736 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 NPAS2Q99743 824 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 SGPP1Q9BX95 441 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 EPS8L2Q9H6S3 715 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 SLC24A3Q9HC58 644 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 OLAHQ9NV23 265 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 STMN3Q9NZ72 180 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 FBN2P35556 2912 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 MYO9AB2RTY4 2548 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 CSMD2Q7Z408 3487 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF839A8K0R7 811 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 H0YIG0 161 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 PGRMC1O00264 195 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 EIF3FO00303 357 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 TXNDC9O14530 226 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 NRDCO43847 1150 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ZG16O60844 167 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 SEC24DO94855 1032 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 CCNDBP1O95273 360 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 NSA2O95478 260 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 B3GALT4O96024 378 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 C8orf89P0DMQ9 161 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 IL1RNP18510 177 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 PGAM1P18669 254 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 FDXRP22570 491 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 CXCR2P25025 360 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 MEF2AQ02078 507 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 DHX9Q08211 1270 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 NAE1Q13564 534 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ELOAQ14241 798 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ESPL1Q14674 2120 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ZRSR2Q15696 482 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 TEDDM1Q5T9Z0 273 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 THEMIS2Q5TEJ8 643 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 C1QL3Q5VWW1 255 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 FCRLBQ6BAA4 426 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 HIBCHQ6NVY1 386 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 H3F3CQ6NXT2 135 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 TRMT10BQ6PF06 316 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 TMEM207Q6UWW9 146 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 RIPOR1Q6ZS17 1223 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 SLC26A11Q86WA9 606 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 CNTN4Q8IWV2 1026 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 LMNTD2Q8IXW0 634 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 PPIL6Q8IXY8 311 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 SLC35F6Q8N357 371 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF740Q8NDX6 193 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 ABHD11Q8NFV4 315 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 OR4K1Q8NGD4 311 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 OR5T3Q8NGG3 340 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 MCOLN3Q8TDD5 553 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 PYCR2Q96C36 320 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 EBNA1BP2Q99848 306 aaKnown RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 TUBB6Q9BUF5 446 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 SPNS1Q9H2V7 528 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 PARVBQ9HBI1 364 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 CCDC177Q9NQR7 707 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-207ENST00000475549 LANCL2Q9NS86 450 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 C14orf105Q9NVL8 296 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 HCN3Q9P1Z3 774 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 COMMD10Q9Y6G5 202 aa6.63□□□□□ -1.35
HDAC3-207ENST00000475549 SNRNP200O75643 2136 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 TRAV17A0A0B4J275 112 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 DYTNA2CJ06 578 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF860A6NHJ4 632 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 A8MUI8 341 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SLC16A5O15375 505 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 RDH16O75452 317 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CDC123O75794 336 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 WFS1O76024 890 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 C8GP07360 202 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ANXA5P08758 320 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CDH1P12830 882 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 HRH2P25021 359 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ELK3P41970 407 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 XCR1P46094 333 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 AVPR1BP47901 424 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 FNTAP49354 379 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 RPS15AP62244 130 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 RHAGQ02094 409 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 HYAL2Q12891 473 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 PTK6Q13882 451 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 MINDY4Q4G0A6 757 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ACER2Q5QJU3 275 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CATSPEREQ5SY80 951 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms