RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ACSL3O95573 720 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 SLC16A8O95907 504 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 STMN1P16949 149 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 MRPL49Q13405 166 aaKnown RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 ZNF460Q14592 562 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.12e-7■■■■■ 46.7
VARS-223ENST00000474643 NR6A1Q15406 480 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 EIF2S3LQ2VIR3 472 aaKnown RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 ICE2Q659A1 982 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 RAPH1Q70E73 1250 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 FBXO15Q8NCQ5 510 aaPredicted RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 PPFIBP2Q8ND30 876 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 MYRIPQ8NFW9 859 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 ALKBH8Q96BT7 664 aaKnown RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 MMABQ96EY8 250 aaPredicted RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 THOC3Q96J01 351 aaKnown RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 CYTH2Q99418 400 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 SPSB2Q99619 263 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 WDR77Q9BQA1 342 aaPredicted RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 LHPPQ9H008 270 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 SLC26A1Q9H2B4 701 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 CDC42EP4Q9H3Q1 356 aaKnown RBP14.41□□□□□ -0.1
VARS-223ENST00000474643 TRPC4Q9UBN4 977 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 ADAMTS6Q9UKP5 1117 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 IKBKGQ9Y6K9 419 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 LOC105369274A0A096LPK9 316 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 LOC102723532A0A0G2JNH3 316 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 OR2A25A4D2G3 310 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 CLEC18AA5D8T8 446 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 H0YGG7 62 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 TXNDC9O14530 226 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 SOCS6O14544 535 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 FAM155BO75949 473 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 HEXBP07686 556 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 ZGLP1P0C6A0 271 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 EZRP15311 586 aaKnown RBP14.4□□□□□ -0.1
VARS-223ENST00000474643 ZNF37AP17032 561 aaPredicted RBP14.4□□□□□ -0.1
VARS-223ENST00000474643 ARF3P61204 181 aaPredicted RBP14.4□□□□□ -0.1
VARS-223ENST00000474643 KLC1Q07866 573 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 NDUFA9Q16795 377 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 C4orf17Q53FE4 359 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 MFSD4BQ5TF39 518 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 EMBQ6PCB8 327 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 IGFL3Q6UXB1 125 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 CLEC18BQ6UXF7 455 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 FRA10AC1Q70Z53 315 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 COX15Q7KZN9 410 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 TRMT10CQ7L0Y3 403 aaKnown RBP14.4□□□□□ -0.1
VARS-223ENST00000474643 OR4N4Q8N0Y3 316 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 CLEC18CQ8NCF0 446 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 DNAJB14Q8TBM8 379 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 STT3BQ8TCJ2 826 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 ZNF480Q8WV37 535 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 SNRNP40Q96DI7 357 aaKnown RBP14.4□□□□□ -0.1
VARS-223ENST00000474643 CCDC138Q96M89 665 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 PLCD4Q9BRC7 762 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 PARD6BQ9BYG5 372 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 CAB39LQ9H9S4 337 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 POPDC3Q9HBV1 291 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 ASF1BQ9NVP2 202 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 ARL15Q9NXU5 204 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 STOX2Q9P2F5 926 aaPredicted RBP14.4□□□□□ -0.1
VARS-223ENST00000474643 PDE10AQ9Y233 779 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 KLK4Q9Y5K2 254 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 HS3ST3B1Q9Y662 390 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 HEATR5BQ9P2D3 2071 aa14.4□□□□□ -0.1
VARS-223ENST00000474643 NSG1A0A0A6YYJ2 146 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 A0A1W2PPV9 198 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
VARS-223ENST00000474643 NRP2O60462 931 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 GUCA1CO95843 209 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 GCGRP47871 477 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 ABATP80404 500 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 PRDX1Q06830 199 aaKnown RBP14.39□□□□□ -0.11
VARS-223ENST00000474643 CDC16Q13042 620 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 KIRREL2Q6UWL6 708 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 LINC00696Q6ZRV3 163 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 CEP97Q8IW35 865 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 OR11G2Q8NGC1 345 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 UHMK1Q8TAS1 419 aaKnown RBP14.39□□□□□ -0.11
VARS-223ENST00000474643 C19orf60Q96EN9 201 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 MVB12AQ96EY5 273 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 ZNF285Q96NJ3 590 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 GPR22Q99680 433 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 FUT8Q9BYC5 575 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 DRC3Q9H069 523 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 ZNF160Q9HCG1 818 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 CCDC177Q9NQR7 707 aaPredicted RBP14.39□□□□□ -0.11
VARS-223ENST00000474643 C14orf105Q9NVL8 296 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 CUEDC1Q9NWM3 386 aaPredicted RBP14.39□□□□□ -0.11
VARS-223ENST00000474643 CTNNAL1Q9UBT7 734 aa14.39□□□□□ -0.11
VARS-223ENST00000474643 FER1L5A0AVI2 2057 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 DYTNA2CJ06 578 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 NPEPPSL1A6NEC2 478 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 ANKUB1A6NFN9 424 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 CYSRT1A8MQ03 144 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 TSPAN12O95859 305 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 INHBAP08476 426 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 ERGP11308 486 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms