RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PYGBP11216 843 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 TFEBP19484 476 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 ITGAXP20702 1163 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 GDF5P43026 501 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 OR1D4P47884 311 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 FOXL2P58012 376 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 MEF2AQ02078 507 aaPredicted RBP16.25■□□□□ 0.19
VPS52-215ENST00000464425 RELAQ04206 551 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 IL10RAQ13651 578 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 TGFBIQ15582 683 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 PRTGQ2VWP7 1150 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 CRTC2Q53ET0 693 aaPredicted RBP16.25■□□□□ 0.19
VPS52-215ENST00000464425 CEP85LQ5SZL2 805 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 YOD1Q5VVQ6 348 aaPredicted RBP16.25■□□□□ 0.19
VPS52-215ENST00000464425 SYVN1Q86TM6 617 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 TRABD2AQ86V40 505 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 THOC6Q86W42 341 aaKnown RBP16.25■□□□□ 0.19
VPS52-215ENST00000464425 PLD6Q8N2A8 252 aaKnown RBP16.25■□□□□ 0.19
VPS52-215ENST00000464425 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 EXT2Q93063 718 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 RHBDF1Q96CC6 855 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 PKNOX2Q96KN3 472 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 TSNARE1Q96NA8 513 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 ALG9Q9H6U8 611 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 ENAMQ9NRM1 1142 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 SLC22A11Q9NSA0 550 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 RNF112Q9ULX5 631 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 RUVBL1Q9Y265 456 aaKnown RBP16.25■□□□□ 0.19
VPS52-215ENST00000464425 MAU2Q9Y6X3 613 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 FER1L5A0AVI2 2057 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 P2RX6O15547 441 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 KERAO60938 352 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 RBP1P09455 135 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 FAM87AP0C7U9 286 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 KCNC1P48547 511 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 HNMTP50135 292 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 CCR8P51685 355 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 RPS15AP62244 130 aaKnown RBP16.24■□□□□ 0.19
VPS52-215ENST00000464425 SLC18A2Q05940 514 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 FBXO48Q5FWF7 155 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 CATSPEREQ5SY80 951 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 EXD3Q8N9H8 876 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 SLC5A11Q8WWX8 675 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 NEIL2Q969S2 332 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 PGM2Q96G03 612 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 C10orf90Q96M02 699 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 ATOH8Q96SQ7 321 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 MACROD1Q9BQ69 325 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 C17orf62Q9BQA9 187 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 CD274Q9NZQ7 290 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 PTRH2Q9Y3E5 179 aaKnown RBP16.24■□□□□ 0.19
VPS52-215ENST00000464425 DYRK1BQ9Y463 629 aa16.24■□□□□ 0.19
VPS52-215ENST00000464425 EIF4E1BA6NMX2 242 aaKnown RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 SYCE1LA8MT33 242 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 FOXO6A8MYZ6 492 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 GOLGA8RI6L899 631 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 RGS16O15492 202 aaPredicted RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 TAPBPO15533 448 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 LCMT2O60294 686 aaKnown RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 CNOT3O75175 753 aaKnown RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 KLF7O75840 302 aaPredicted RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 WDR47O94967 919 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 RECKO95980 971 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 KRT4P19013 534 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 GRK3P35626 688 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 BCL6P41182 706 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 CCR10P46092 362 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 CCT5P48643 541 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 UGT8Q16880 541 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 MUM1Q2TAK8 710 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 TNFAIP8L3Q5GJ75 292 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 VN1R4Q7Z5H5 301 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 TMEM151BQ8IW70 566 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 ABHD11Q8NFV4 315 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 COL26A1Q96A83 441 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 ESAMQ96AP7 390 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 WBP1Q96G27 269 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 MRPL57Q9BQC6 102 aaKnown RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 FAM117AQ9C073 453 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 WWOXQ9NZC7 414 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 SENP1Q9P0U3 644 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 POLHQ9Y253 713 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 PADI2Q9Y2J8 665 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 MDC1Q14676 2089 aaKnown RBP16.23■□□□□ 0.19
VPS52-215ENST00000464425 ATRXP46100 2492 aa16.23■□□□□ 0.19
VPS52-215ENST00000464425 KCNE1BA0A087WTH5 132 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 TXNDC9O14530 226 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 OR1F1O43749 312 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 PRB1P04280 392 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 PIM1P11309 404 aaPredicted RBP16.22■□□□□ 0.19
VPS52-215ENST00000464425 CRHR1P34998 444 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 GGT5P36269 586 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 GLRBP48167 497 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 TECRLQ5HYJ1 363 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 SULT1C3Q6IMI6 304 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 MRPL14Q6P1L8 145 aaKnown RBP16.22■□□□□ 0.19
VPS52-215ENST00000464425 COX15Q7KZN9 410 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 OVCH1Q7RTY7 1134 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 TCAIMQ8N3R3 496 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms