RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 IZUMO3Q5VZ72 239 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3GQ6DHY5 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 HIST2H2BCQ6DN03 193 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3CQ6IPX1 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 HIBCHQ6NVY1 386 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF783Q6ZMS7 281 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 RBM44Q6ZP01 1051 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 GSTA5Q7RTV2 222 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PID1Q7Z2X4 250 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CAND1Q86VP6 1230 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CAMK1DQ8IU85 385 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3Q8IZP1 549 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 STK40Q8N2I9 435 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ATP11CQ8NB49 1132 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 MNS1Q8NEH6 495 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 IPMKQ8NFU5 416 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 OR52K1Q8NGK4 314 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 MAPK15Q8TD08 544 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 XAGE5Q8WWM1 108 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ARRDC3Q96B67 414 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 EID2BQ96D98 161 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PSKH2Q96QS6 385 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 OMDQ99983 421 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ERP44Q9BS26 406 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 FICDQ9BVA6 458 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PTDSS2Q9BVG9 487 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PARD6BQ9BYG5 372 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 IL1RAPL1Q9NZN1 696 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 XPR1Q9UBH6 696 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PLEKHB1Q9UF11 243 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ASIC3Q9UHC3 531 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 RSPH14Q9UHP6 348 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 NDRG4Q9ULP0 352 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 NFU1Q9UMS0 254 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CHKBQ9Y259 395 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ITM2BQ9Y287 266 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC187A0A096LP49 1063 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 GOLGA6L10A0A0M3HER8 536 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 A1L4Q6 167 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TYW5A2RUC4 315 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 A8MX80 341 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 NTN3O00634 580 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TPP1O14773 563 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PLRG1O43660 514 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 BUD23O43709 281 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 JTBO76095 146 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SRPRAP08240 638 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ALPIP09923 528 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PRSS56P0CW18 603 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ALPPL2P10696 532 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CTPS1P17812 591 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 GM2AP17900 193 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 LHCGRP22888 699 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CETN2P41208 172 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MAGEA3P43357 314 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MAGEA6P43360 314 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PLTPP55058 493 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 LOXL3P58215 753 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MTA1Q13330 715 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 EIF3IQ13347 325 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 DHX34Q14147 1143 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF235Q14590 738 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PPP1R7Q15435 360 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 UAP1Q16222 522 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC38Q502W7 563 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CERCAMQ5T4B2 595 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 DEPDC1Q5TB30 811 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MARC1Q5VT66 337 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 DENND2CQ68D51 928 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF425Q6IV72 752 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 NEK5Q6P3R8 708 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CES3Q6UWW8 571 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PARS2Q7L3T8 475 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 C1QL2Q7Z5L3 287 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 YTHDF3Q7Z739 585 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ABI3BPQ7Z7G0 1075 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TSPAN33Q86UF1 283 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PELI3Q8N2H9 469 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SLC25A41Q8N5S1 370 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MYRIPQ8NFW9 859 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 OR2AP1Q8NGE2 309 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PPP1R35Q8TAP8 253 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 NAT14Q8WUY8 206 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PIH1D2Q8WWB5 315 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MAIP1Q8WWC4 291 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ART4Q93070 314 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SERPINB12Q96P63 405 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 FCRL5Q96RD9 977 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 NAP1L3Q99457 506 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CINPQ9BW66 212 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TDRD1Q9BXT4 1180 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 FRMD8P1Q9BZ68 369 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TXLNGYQ9BZA5 131 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 B3GNT4Q9C0J1 378 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZDHHC6Q9H6R6 413 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 DUSP22Q9NRW4 184 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 NCKIPSDQ9NZQ3 722 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SLC2A6Q9UGQ3 507 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ANAPC2Q9UJX6 822 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SPTBN1Q01082 2364 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms