RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF175Q9Y473 711 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ASB3Q9Y575 518 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FKBP7Q9Y680 259 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FAM205CA6NFA0 338 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TO15178 435 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LGR5O75473 907 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SRCP12931 536 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CCR8P51685 355 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FAAP100Q0VG06 881 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PWP1Q13610 501 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GPR176Q14439 515 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SLC30A10Q6XR72 485 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ACBD4Q8NC06 268 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TAAR8Q969N4 342 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PHF21BQ96EK2 531 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NTPCRQ9BSD7 190 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 BRD9Q9H8M2 597 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 OSGEPQ9NPF4 335 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TIGARQ9NQ88 270 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FAIMQ9NVQ4 179 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 KIAA1522Q9P206 1035 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 APBB3O95704 486 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MYCLP1P12525 358 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 S1PR1P21453 382 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SPAM1P38567 509 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 IFI35P80217 286 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MRPL49Q13405 166 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CBX2Q14781 532 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 KCNIP4Q6PIL6 250 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MINDY1Q8N5J2 469 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 HTRA1Q92743 480 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SLC2A13Q96QE2 648 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF717Q9BY31 904 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ENY2Q9NPA8 101 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TMA7Q9Y2S6 64 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CBY1Q9Y3M2 126 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RBM7Q9Y580 266 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NUBP2Q9Y5Y2 271 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 A0A1W2PRB8 838 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 H3BM21 787 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GTPBP1O00178 669 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FAAHO00519 579 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CASC3O15234 703 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FOXN1O15353 648 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MOCS2O96007 188 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CSF3P09919 207 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PKLRP30613 574 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NUDT1P36639 197 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CD97P48960 835 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 COTL1Q14019 142 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MED27Q6P2C8 311 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FAM171BQ6P995 826 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LRRC28Q86X40 367 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GHDCQ8N2G8 530 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LRRC58Q96CX6 371 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RBM18Q96H35 190 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MKKSQ9NPJ1 570 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MED17Q9NVC6 651 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PCDHB3Q9Y5E6 796 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 BDP1A6H8Y1 2624 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SBF2Q86WG5 1849 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SALL3Q9BXA9 1300 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GPR89AB7ZAQ6 455 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 M0R036 132 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RNF13O43567 381 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LCMT2O60294 686 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GPR137BO60478 399 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GPR89BP0CG08 455 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MYF6P23409 242 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 IL10RBQ08334 325 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 KEAP1Q14145 624 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ANKDD1AQ495B1 522 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CRTC2Q53ET0 693 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PDSS1Q5T2R2 415 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 C3orf33Q6P1S2 294 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PNCKQ6P2M8 343 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 OR56B4Q8NH76 319 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM80Q96HE8 168 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SLC35C2Q9NQQ7 365 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NCOA6Q14686 2063 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SPATA31A5Q5VU36 1347 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SPATA31A7Q8IWB4 1347 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GJE1A6NN92 205 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 VEGFDO43915 354 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 EEDO75530 441 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ADH1AP07327 375 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CD48P09326 243 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 HDCP19113 662 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MGAT1P26572 445 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ADGRF1Q5T601 910 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GLT8D1Q68CQ7 371 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NCEH1Q6PIU2 408 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RTL10Q7L3V2 364 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CD163Q86VB7 1156 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PAQR7Q86WK9 346 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF781Q8N8C0 355 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 OR5T3Q8NGG3 340 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 OR6T1Q8NGN1 323 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms