RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 PCDHA13Q9Y5I0 950 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 IGLV3-16A0A075B6K0 115 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 OR14I1A6ND48 311 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 C5orf60A6NFR6 353 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 H0YGG7 62 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 PJA2O43164 708 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 CNOT4O95628 575 aaKnown RBP11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 CYP1A2P05177 515 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 AGTR2P50052 363 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 HLCSP50747 726 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 NR0B1P51843 470 aaKnown RBP11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 ARF3P61204 181 aaPredicted RBP11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 MAT1AQ00266 395 aaKnown RBP11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 PLOD1Q02809 727 aaPredicted RBP11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 KIF5AQ12840 1032 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 GPR33Q49SQ1 333 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 KIF18BQ86Y91 864 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 LINC01560Q8TB33 94 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 ELMO1Q92556 727 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 BTBD6Q96KE9 485 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 IL17FQ96PD4 163 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 SMC6Q96SB8 1091 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 SH3GL2Q99962 352 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 FICDQ9BVA6 458 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 CIDEBQ9UHD4 219 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 SLC39A10Q9ULF5 831 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 RUVBL1Q9Y265 456 aaKnown RBP11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 KLK4Q9Y5K2 254 aa11.79□□□□□ -0.52
AC004540.1-204ENST00000449537 A0A0A6YYC8 382 aaPredicted RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 I3L1I5 382 aaPredicted RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 FOXS1O43638 330 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 AP2A2O94973 939 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 HRGP04196 525 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 PTPN3P26045 913 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 CD68P34810 354 aaPredicted RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 TRHRP34981 398 aaPredicted RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 ASCL1P50553 236 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 PPIAP62937 165 aaKnown RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 POU4F3Q15319 338 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 FBXL19-AS1Q494R0 122 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 DNAJC21Q5F1R6 531 aaKnown RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 RIPPLY2Q5TAB7 128 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 GARNL3Q5VVW2 1013 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 HEPHL1Q6MZM0 1159 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 PAPD4Q6PIY7 484 aaKnown RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 RNF44Q7L0R7 432 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 TAS2R42Q7RTR8 314 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 SERPINA9Q86WD7 417 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 IPMKQ8NFU5 416 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 LPAR4Q99677 370 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 DRC3Q9H069 523 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 ALKBH4Q9NXW9 302 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 MTRF1LQ9UGC7 380 aaKnown RBP11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 ACAD8Q9UKU7 415 aa11.78□□□□□ -0.52
AC004540.1-204ENST00000449537 SLC5A10A0PJK1 596 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 HSPB2A8KAH6 182 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 MYO1FO00160 1098 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 DVL2O14641 736 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 PPP1R12AO14974 1030 aaPredicted RBP11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 NRP2O60462 931 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 WDR1O75083 606 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 RPN2P04844 631 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 ACRV1P26436 265 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 ARHGAP25P42331 645 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 CDKN1CP49918 316 aaPredicted RBP11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 MLF1P58340 268 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 GPR85P60893 370 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 HSPB2Q16082 182 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 SFT2D3Q587I9 215 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 KIAA0930Q6ICG6 404 aaPredicted RBP11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 HIPK1Q86Z02 1210 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 ULK2Q8IYT8 1036 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 RNF10Q8N5U6 811 aaKnown RBP11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 CSNK1A1LQ8N752 337 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 PLD5Q8N7P1 536 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 OR13C4Q8NGS5 318 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 MIPEPQ99797 713 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
AC004540.1-204ENST00000449537 A0A1W2PPR1 153 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 MBD3L4A6NDZ8 208 aaPredicted RBP11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 OR2W5A6NFC9 320 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 MBD3L5A6NJ08 208 aaPredicted RBP11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 AGTP01019 485 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 FTH1P02794 183 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 NFKB1P19838 968 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 BMP5P22003 454 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 AVPR1BP47901 424 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 PLGLB1Q02325 96 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 DMTNQ08495 405 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 PTK6Q13882 451 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 HKDC1Q2TB90 917 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 RGS9BPQ6ZS82 235 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 SYCE1Q8N0S2 351 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 RELL2Q8NC24 303 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms