RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MESP1Q9BRJ9 268 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 LRRC1Q9BTT6 524 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 MFRPQ9BY79 579 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 CLMPQ9H6B4 373 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 ATP13A2Q9NQ11 1180 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 C14orf105Q9NVL8 296 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 LUZP4Q9P127 313 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 DYRK1BQ9Y463 629 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 OARD1Q9Y530 152 aa20.01■□□□□ 0.79
CDKN3-204ENST00000442975 KCNE1BA0A087WTH5 132 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 NCF1BA6NI72 391 aaPredicted RBP20■□□□□ 0.79
CDKN3-204ENST00000442975 NCF1CA8MVU1 366 aaPredicted RBP20■□□□□ 0.79
CDKN3-204ENST00000442975 MAP2K7O14733 419 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 FOXS1O43638 330 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 DPM1O60762 260 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 SLC35G6P0C7Q6 338 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 NCF1P14598 390 aaPredicted RBP20■□□□□ 0.79
CDKN3-204ENST00000442975 ACPPP15309 386 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 STMN1P16949 149 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 IL1RNP18510 177 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 MLLT10P55197 1068 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 SNRPNP63162 240 aaKnown RBP20■□□□□ 0.79
CDKN3-204ENST00000442975 MYBPC3Q14896 1274 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 EFTUD2Q15029 972 aaKnown RBP eCLIP20■□□□□ 0.79
CDKN3-204ENST00000442975 TUBB8Q3ZCM7 444 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 KBTBD12Q3ZCT8 623 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 CATSPEREQ5SY80 951 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 KIRREL2Q6UWL6 708 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 PRSS41Q7RTY9 318 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 TMPRSS11BQ86T26 416 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 CAMKVQ8NCB2 501 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 FBF1Q8TES7 1133 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 C8orf44Q96CB5 159 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 VPS50Q96JG6 964 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 GPR22Q99680 433 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 LRRC4CQ9HCJ2 640 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 PCDHGB7Q9Y5F8 929 aa20■□□□□ 0.79
CDKN3-204ENST00000442975 IGLV3-12A0A075B6K2 115 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 NDUFS4O43181 175 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 OR1F1O43749 312 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 FAM155BO75949 473 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 SERPIND1P05546 499 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 SLC26A3P40879 764 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 AIMP2Q13155 320 aaKnown RBP19.99■□□□□ 0.79
CDKN3-204ENST00000442975 FAM53BQ14153 422 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 CSHL1Q14406 222 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 IGFBP7Q16270 282 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 IRAK1BP1Q5VVH5 260 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 FAAH2Q6GMR7 532 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 THOC6Q86W42 341 aaKnown RBP19.99■□□□□ 0.79
CDKN3-204ENST00000442975 ZC3H7AQ8IWR0 971 aaKnown RBP19.99■□□□□ 0.79
CDKN3-204ENST00000442975 TBC1D19Q8N5T2 526 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 MFSD9Q8NBP5 474 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 ABHD11Q8NFV4 315 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 OR11G2Q8NGC1 345 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 SLC13A3Q8WWT9 602 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 ANKRD7Q92527 254 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 NEIL2Q969S2 332 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 DERL2Q9GZP9 239 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 MKKSQ9NPJ1 570 aaPredicted RBP19.99■□□□□ 0.79
CDKN3-204ENST00000442975 HCN3Q9P1Z3 774 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 MAP4K5Q9Y4K4 846 aa19.99■□□□□ 0.79
CDKN3-204ENST00000442975 TTLL8A6PVC2 850 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 IDSB3KWA1 339 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 LCMT2O60294 686 aaKnown RBP19.98■□□□□ 0.79
CDKN3-204ENST00000442975 C1QAP02745 245 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 HEXBP07686 556 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 CCDC166P0CW27 439 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 SPRP35270 261 aaPredicted RBP19.98■□□□□ 0.79
CDKN3-204ENST00000442975 EMP2P54851 167 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 MFSD4BQ5TF39 518 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 TMEM214Q6NUQ4 689 aaKnown RBP19.98■□□□□ 0.79
CDKN3-204ENST00000442975 LAPTM4BQ86VI4 370 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 KCT2Q8NC54 265 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 EXT2Q93063 718 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 SMAD5Q99717 465 aaKnown RBP19.98■□□□□ 0.79
CDKN3-204ENST00000442975 ANKHQ9HCJ1 492 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 PLAAQ9Y263 795 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 SLC22A14Q9Y267 594 aa19.98■□□□□ 0.79
CDKN3-204ENST00000442975 TRBC2A0A5B9 178 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 SGK494L7N484 410 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 WDR47O94967 919 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 HNMTP50135 292 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 RAB10P61026 200 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 FOXK1P85037 733 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 CDKL1Q00532 357 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 EEF1A2Q05639 463 aaKnown RBP19.97■□□□□ 0.79
CDKN3-204ENST00000442975 C18orf21Q32NC0 220 aaPredicted RBP19.97■□□□□ 0.79
CDKN3-204ENST00000442975 MINDY4Q4G0A6 757 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 GRTP1Q5TC63 336 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 RAPH1Q70E73 1250 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 CYS1Q717R9 158 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 PARP9Q8IXQ6 854 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 NOA1Q8NC60 698 aaKnown RBP19.97■□□□□ 0.79
CDKN3-204ENST00000442975 ZNF740Q8NDX6 193 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 MNS1Q8NEH6 495 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 MRRFQ96E11 262 aaKnown RBP19.97■□□□□ 0.79
CDKN3-204ENST00000442975 FAM129AQ9BZQ8 928 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 SPNS1Q9H2V7 528 aa19.97■□□□□ 0.79
CDKN3-204ENST00000442975 ZNF160Q9HCG1 818 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms