RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC1A2P43004 574 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 ZNF33BQ06732 778 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 TMEM207Q6UWW9 146 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 LANCL3Q6ZV70 420 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 UBE2R2Q712K3 238 aaPredicted RBP14.01□□□□□ -0.17
RPS28-201ENST00000417088 CPEB2Q7Z5Q1 589 aaKnown RBP14.01□□□□□ -0.17
RPS28-201ENST00000417088 CPNE9Q8IYJ1 553 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 MCUQ8NE86 351 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 SUN3Q8TAQ9 357 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 ITLN2Q8WWU7 325 aaPredicted RBP14.01□□□□□ -0.17
RPS28-201ENST00000417088 MACROD1Q9BQ69 325 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 OR2W5A6NFC9 320 aa14□□□□□ -0.17
RPS28-201ENST00000417088 A8MUI8 341 aa14□□□□□ -0.17
RPS28-201ENST00000417088 GOLGA6L6A8MZA4 724 aa14□□□□□ -0.17
RPS28-201ENST00000417088 GOLGA8MH3BSY2 632 aa14□□□□□ -0.17
RPS28-201ENST00000417088 WISP2O76076 250 aa14□□□□□ -0.17
RPS28-201ENST00000417088 CYC1P08574 325 aa14□□□□□ -0.17
RPS28-201ENST00000417088 IL1RNP18510 177 aa14□□□□□ -0.17
RPS28-201ENST00000417088 HRH2P25021 359 aa14□□□□□ -0.17
RPS28-201ENST00000417088 GRNP28799 593 aaKnown RBP14□□□□□ -0.17
RPS28-201ENST00000417088 BCL6P41182 706 aa14□□□□□ -0.17
RPS28-201ENST00000417088 RPS15AP62244 130 aaKnown RBP14□□□□□ -0.17
RPS28-201ENST00000417088 CSNK1G2P78368 415 aa14□□□□□ -0.17
RPS28-201ENST00000417088 ART3Q13508 389 aa14□□□□□ -0.17
RPS28-201ENST00000417088 MINDY4Q4G0A6 757 aa14□□□□□ -0.17
RPS28-201ENST00000417088 PLAG1Q6DJT9 500 aa14□□□□□ -0.17
RPS28-201ENST00000417088 H3F3CQ6NXT2 135 aa14□□□□□ -0.17
RPS28-201ENST00000417088 AGGF1Q8N302 714 aaeCLIP14□□□□□ -0.17
RPS28-201ENST00000417088 TRIM58Q8NG06 486 aa14□□□□□ -0.17
RPS28-201ENST00000417088 OR51Q1Q8NH59 317 aa14□□□□□ -0.17
RPS28-201ENST00000417088 SERPINB12Q96P63 405 aa14□□□□□ -0.17
RPS28-201ENST00000417088 XAB2Q9HCS7 855 aaKnown RBP14□□□□□ -0.17
RPS28-201ENST00000417088 CCDC177Q9NQR7 707 aaPredicted RBP14□□□□□ -0.17
RPS28-201ENST00000417088 C20orf96Q9NUD7 363 aaPredicted RBP14□□□□□ -0.17
RPS28-201ENST00000417088 HCN3Q9P1Z3 774 aa14□□□□□ -0.17
RPS28-201ENST00000417088 SEC14L3Q9UDX4 400 aa14□□□□□ -0.17
RPS28-201ENST00000417088 TEKT2Q9UIF3 430 aa14□□□□□ -0.17
RPS28-201ENST00000417088 FBXO5Q9UKT4 447 aa14□□□□□ -0.17
RPS28-201ENST00000417088 PCNX1Q96RV3 2341 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 SCN2AQ99250 2005 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 CCL21O00585 134 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 HAUS5O94927 633 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 CCDC175P0C221 793 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 MYBL2P10244 700 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 CA7P43166 264 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 MAGEA3P43357 314 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 XCR1P46094 333 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 TBPL1P62380 186 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 MPP1Q00013 466 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 PTK6Q13882 451 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 LONRF1Q17RB8 773 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 BTBD16Q32M84 506 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 MFSD4BQ5TF39 518 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 FCRLBQ6BAA4 426 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 TMEM214Q6NUQ4 689 aaKnown RBP13.99□□□□□ -0.17
RPS28-201ENST00000417088 ANKRD37Q7Z713 158 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 MCEMP1Q8IX19 187 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 LMNTD2Q8IXW0 634 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 MCOLN3Q8TDD5 553 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 TM4SF19Q96DZ7 209 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 THAP11Q96EK4 314 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 CCDC120Q96HB5 630 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 ZNF354BQ96LW1 612 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 AARSD1Q9BTE6 412 aaKnown RBP13.99□□□□□ -0.17
RPS28-201ENST00000417088 SUCOQ9UBS9 1254 aaKnown RBP13.99□□□□□ -0.17
RPS28-201ENST00000417088 C19orf25Q9UFG5 118 aaPredicted RBP13.99□□□□□ -0.17
RPS28-201ENST00000417088 ADAMTS6Q9UKP5 1117 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 SH2B3Q9UQQ2 575 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 KLF2Q9Y5W3 355 aaPredicted RBP13.99□□□□□ -0.17
RPS28-201ENST00000417088 COMMD10Q9Y6G5 202 aa13.99□□□□□ -0.17
RPS28-201ENST00000417088 TEP1Q99973 2627 aaKnown RBP13.98□□□□□ -0.17
RPS28-201ENST00000417088 FEZF1A0PJY2 475 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 SGK494L7N484 410 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 EIF3FO00303 357 aaPredicted RBP13.98□□□□□ -0.17
RPS28-201ENST00000417088 LCMT2O60294 686 aaKnown RBP13.98□□□□□ -0.17
RPS28-201ENST00000417088 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
RPS28-201ENST00000417088 AGTR2P50052 363 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 TIAL1Q01085 375 aaKnown RBP eCLIP13.98□□□□□ -0.17
RPS28-201ENST00000417088 PMP22Q01453 160 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.98□□□□□ -0.17
RPS28-201ENST00000417088 ZNF766Q5HY98 468 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 ACER2Q5QJU3 275 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 PCGF5Q86SE9 256 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 MRGPRGQ86SM5 289 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 PDSS2Q86YH6 399 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 BEST3Q8N1M1 668 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 KCT2Q8NC54 265 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 CAMKVQ8NCB2 501 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 CALML6Q8TD86 181 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 MAGOHBQ96A72 148 aaKnown RBP13.98□□□□□ -0.17
RPS28-201ENST00000417088 SIGLEC10Q96LC7 697 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 CCDC138Q96M89 665 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 PCBD2Q9H0N5 130 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 PDE10AQ9Y233 779 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 NEU2Q9Y3R4 380 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 MAD1L1Q9Y6D9 718 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 SCN3AQ9NY46 2000 aa13.98□□□□□ -0.17
RPS28-201ENST00000417088 PKDREJQ9NTG1 2253 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 TUBA3CQ13748 450 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 NAA30Q147X3 362 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms