RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 RNF111Q6ZNA4 994 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 C9orf43Q8TAL5 461 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 HSFY1Q96LI6 401 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 HCAR1Q9BXC0 346 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 KIAA1683Q9H0B3 1180 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MED28Q9H204 178 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ADAP2Q9NPF8 381 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 THAP1Q9NVV9 213 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 LRRC10BA6NIK2 292 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 RNASEK-C17orf49H0YIS7 233 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 WNT9AO14904 365 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 BCAS2O75934 225 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 CBX6O95503 412 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 NCBP2P52298 156 aaKnown RBP eCLIP3.3□□□□□ -1.88
NEB-204ENST00000409198 ZPBP2Q6X784 338 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SLITRK4Q8IW52 837 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 EPS8L3Q8TE67 593 aaKnown RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 SNAPC3Q92966 411 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 FER1L6-AS2Q96M78 137 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MIPEPQ99797 713 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 PLK2Q9NYY3 685 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ZNF451Q9Y4E5 1061 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 PNPLA7Q6ZV29 1317 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 FAM240BA0A1B0GVZ2 78 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 C5orf60A6NFR6 353 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 PRKD3O94806 890 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 UNC5CO95185 931 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 CHRNA1P02708 482 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ELNP15502 786 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 LHCGRP22888 699 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 UGT1A3P35503 534 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SCTRP47872 440 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MAZP56270 477 aaKnown RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 GPX6P59796 221 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ADGRE1Q14246 886 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SYT16Q17RD7 645 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MAMDC2Q7Z304 686 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 GALNT12Q8IXK2 581 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 CNEP1R1Q8N9A8 125 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 HM13Q8TCT9 377 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 GLYATL2Q8WU03 294 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 KLRG1Q96E93 195 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 FBXL20Q96IG2 436 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MAP3K14Q99558 947 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 FAM105AQ9NUU6 356 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 CD207Q9UJ71 328 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ZNF490Q9ULM2 529 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 SLC38A8A6NNN8 435 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SPATA31C2B4DYI2 1134 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SCAMP3O14828 347 aaKnown RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 ZNF780AO75290 641 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 TACR2P21452 398 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 RPL14P50914 215 aaKnown RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 LIPEQ05469 1076 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 OR10H4Q8NGA5 316 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ADAMTS18Q8TE60 1221 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ATG4AQ8WYN0 398 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SEMA4DQ92854 862 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 FBXL8Q96CD0 374 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 P2RY13Q9BPV8 354 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 EMC3Q9P0I2 261 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 NDRG3Q9UGV2 375 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 RAB26Q9ULW5 256 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 POMPQ9Y244 141 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MYRFQ9Y2G1 1151 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 INO80Q9ULG1 1556 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 NPHS1O60500 1241 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SGPL1O95470 568 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SLC5A3P53794 718 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 F2RL1P55085 397 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 IRF9Q00978 393 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 TUSC3Q13454 348 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 PRRT3Q5FWE3 981 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MBLAC2Q68D91 279 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 C11orf63Q6NUN7 778 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 BAIAP2L2Q6UXY1 529 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 DEFB107AQ8IZN7 70 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 TBC1D15Q8TC07 691 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ELP5Q8TE02 316 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 CASKIN2Q8WXE0 1202 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SYT3Q9BQG1 590 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 FBXO6Q9NRD1 293 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 LAMP5Q9UJQ1 280 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ATP4AP20648 1035 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 SMSP52788 366 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 PLK1P53350 603 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 NKPD1Q17RQ9 610 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 MOXD1Q6UVY6 613 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 OR1J2Q8NGS2 313 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 ACOT11Q8WXI4 607 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 NR4A3Q92570 626 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 GGHQ92820 318 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 C1orf109Q9NX04 203 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 PCDHGB6Q9Y5F9 930 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 RAI2Q9Y5P3 530 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.3□□□□□ -1.88
NEB-204ENST00000409198 SMIM35A0A1B0GVV1 85 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 TCRBV21S2A2A0A5A6 115 aa3.3□□□□□ -1.88
NEB-204ENST00000409198 AIPO00170 330 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms