RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 LINGO3P0C6S8 592 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 CYBAP13498 195 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 EIF1AXP47813 144 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 ZNF33AQ06730 810 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 ZNF542PQ5EBM4 170 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 LRRC58Q96CX6 371 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 PRAP1Q96NZ9 151 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 NODALQ96S42 347 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 GORASP1Q9BQQ3 440 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 WDR12Q9GZL7 423 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 ZNF860A6NHJ4 632 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 GATBO75879 557 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 NR4A1P22736 598 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 GALK1P51570 392 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 RPS6KA3P51812 740 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 CBX3Q13185 183 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 RUNX3Q13761 415 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 ZNF267Q14586 743 aaPredicted RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 PLEKHS1Q5SXH7 462 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 ANKRD26P1Q6NSI1 321 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 SLC2A7Q6PXP3 512 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 GEMIN6Q8WXD5 167 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 PCDHAC1Q9H158 963 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 FZD3Q9NPG1 666 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 HYKKA2RU49 373 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 CRTC2Q53ET0 693 aaPredicted RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 ADNP2Q6IQ32 1131 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 POLE3Q9NRF9 147 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 WBP11Q9Y2W2 641 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 TRBC2A0A5B9 178 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 IGLON5A6NGN9 336 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 FAM72CH0Y354 149 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 TBX1O43435 398 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 CA3P07451 260 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 MAP3K8P41279 467 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 FAM72AQ5TYM5 149 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 FAM72DQ6L9T8 149 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 DNM1P34Q6PK57 102 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 RPS27LQ71UM5 84 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 FAM72BQ86X60 149 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 PNPLA2Q96AD5 504 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 ASPNQ9BXN1 380 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 C8orf33Q9H7E9 229 aaPredicted RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 PIAS3Q9Y6X2 628 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 MTRF1O75570 445 aaKnown RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 DHFRP00374 187 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 GBX2P52951 348 aaPredicted RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 ADAD1Q96M93 576 aaKnown RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 GPR22Q99680 433 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 ZIM2Q9NZV7 527 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 PDE10AQ9Y233 779 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 PDCD5O14737 125 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 EBLN1P0CF75 366 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 OXTRP30559 389 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 TMEM44Q2T9K0 475 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 LDLRAD1Q5T700 205 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 TMPRSS9Q7Z410 1059 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 TRAM1L1Q8N609 369 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 ZNF676Q8N7Q3 588 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 GLYATL1Q969I3 302 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 TSACCQ96A04 125 aaPredicted RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 PRTFDC1Q9NRG1 225 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 LYARQ9NX58 379 aaKnown RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 ING3Q9NXR8 418 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 LCHNA4D1U4 455 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 OR1I1O60431 355 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 C6orf47O95873 294 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 PGRP06401 933 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 UFM1P61960 85 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 BICRALQ6AI39 1079 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 ZNF852Q6ZMS4 543 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 TICAM1Q8IUC6 712 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 HAVCR1Q96D42 359 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 TPSD1Q9BZJ3 242 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 ZDHHC18Q9NUE0 388 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 FKBP7Q9Y680 259 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 A6NCN8 305 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 ZNF879B4DU55 563 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 DUX1O43812 170 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 AIREO43918 545 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 STC2O76061 302 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 H1F0P07305 194 aaKnown RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 PEX2P28328 305 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 GGT5P36269 586 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 IDNKQ5T6J7 187 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 C17orf99Q6UX52 265 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 LGI4Q8N135 537 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 C2CD4AQ8NCU7 369 aaPredicted RBP13.21□□□□□ -0.29
GPC6-201ENST00000377047 NAT14Q8WUY8 206 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 PTGES2Q9H7Z7 377 aa13.21□□□□□ -0.29
GPC6-201ENST00000377047 CCNOP22674 350 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms