RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ASB11Q8WXH4 323 aa13.03□□□□□ -0.32
CXCL12-202ENST00000374426 LURAP1Q96LR2 239 aa13.03□□□□□ -0.32
CXCL12-202ENST00000374426 PRAP1Q96NZ9 151 aa13.03□□□□□ -0.32
CXCL12-202ENST00000374426 TRIM8Q9BZR9 551 aa13.03□□□□□ -0.32
CXCL12-202ENST00000374426 TINAGQ9UJW2 476 aa13.03□□□□□ -0.32
CXCL12-202ENST00000374426 GFYI3L273 518 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 AVILO75366 819 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.33
CXCL12-202ENST00000374426 CYC1P08574 325 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 COX6B1P14854 86 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 TPSB2P20231 275 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 IMPA1P29218 277 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 SKIV2L2P42285 1042 aaKnown RBP13.02□□□□□ -0.33
CXCL12-202ENST00000374426 KCNJ1P48048 391 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 ST13P50502 369 aaKnown RBP13.02□□□□□ -0.33
CXCL12-202ENST00000374426 CUL1Q13616 776 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 TPSAB1Q15661 275 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 MFSD4BQ5TF39 518 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 NEPROQ6NW34 567 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 XKRXQ6PP77 449 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 GSTA5Q7RTV2 222 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 ANKRD37Q7Z713 158 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF295-AS1Q8N0V1 137 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 PRELID2Q8N945 189 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 OR51Q1Q8NH59 317 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 NPAS2Q99743 824 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 EBNA1BP2Q99848 306 aaKnown RBP13.02□□□□□ -0.33
CXCL12-202ENST00000374426 MACROD1Q9BQ69 325 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 HES7Q9BYE0 225 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 INTS10Q9NVR2 710 aaKnown RBP13.02□□□□□ -0.33
CXCL12-202ENST00000374426 HCN3Q9P1Z3 774 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 PCDHGB6Q9Y5F9 930 aa13.02□□□□□ -0.33
CXCL12-202ENST00000374426 SPG11Q96JI7 2443 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 KCNE1BA0A087WTH5 132 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 MAN1A2O60476 641 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 IL1RNP18510 177 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 XCR1P46094 333 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 CASP6P55212 293 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 PTK6Q13882 451 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 RPS6KA1Q15418 735 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 CDSNQ15517 529 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 TTLL9Q3SXZ7 439 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF470Q6ECI4 717 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 TMEM214Q6NUQ4 689 aaKnown RBP13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF549Q6P9A3 640 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 CYHR1Q6ZMK1 362 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ADAMTS18Q8TE60 1221 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 THAP3Q8WTV1 239 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF354BQ96LW1 612 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 GPR137Q96N19 417 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 TSGA10Q9BZW7 698 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 KLHL1Q9NR64 748 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 TMEM184CQ9NVA4 438 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ANKRD10Q9NXR5 420 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 KLHL42Q9P2K6 505 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 C19orf25Q9UFG5 118 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-202ENST00000374426 VPS9D1Q9Y2B5 631 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF835Q9Y2P0 537 aa13.01□□□□□ -0.33
CXCL12-202ENST00000374426 ASPDHA6ND91 283 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 FAM227AF5H4B4 570 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 C19orf84I3L1E1 186 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 SGK494L7N484 410 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 TTI1O43156 1089 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 MPC1LP0DKB6 136 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 PAMP19021 973 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 AGAP20933 346 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 CD96P40200 585 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 BCL6P41182 706 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 TERF1P54274 439 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
CXCL12-202ENST00000374426 CTBP1Q13363 440 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 OR1C1Q15619 314 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 SPINK14Q6IE38 97 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 Q6ZPB1 254 aaPredicted RBP13□□□□□ -0.33
CXCL12-202ENST00000374426 PCGF5Q86SE9 256 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 CAND1Q86VP6 1230 aaKnown RBP13□□□□□ -0.33
CXCL12-202ENST00000374426 PDSS2Q86YH6 399 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 CRLF3Q8IUI8 442 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 DENND6AQ8IWF6 608 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 KCNJ9Q92806 393 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 SCMH1Q96GD3 660 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 MAGED4Q96JG8 741 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 TSPAN10Q9H1Z9 355 aaPredicted RBP13□□□□□ -0.33
CXCL12-202ENST00000374426 KCNK13Q9HB14 408 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 FBXO6Q9NRD1 293 aaPredicted RBP13□□□□□ -0.33
CXCL12-202ENST00000374426 SH2B3Q9UQQ2 575 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
CXCL12-202ENST00000374426 ZBTB14O43829 449 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 KIF5CO60282 957 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 FGGP02679 453 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 ESRRAP11474 423 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms