RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 MKS1Q9NXB0 559 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 PADI1Q9ULC6 663 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 PCDHGA4Q9Y5G9 962 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 KCNE1BA0A087WTH5 132 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 LOC105369274A0A096LPK9 316 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 LOC102723532A0A0G2JNH3 316 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 LOC101059948A0A1B0GTJ6 334 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 TRBC2A0A5B9 178 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 GOLGA6L10A6NI86 522 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 H0YGG7 62 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 H3BMH7 237 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 KATNA1O75449 491 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 KLK3P07288 261 aaPredicted RBP17.52■□□□□ 0.4
PBX3-205ENST00000373492 SBK3P0C264 359 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 EEF1DP29692 281 aaKnown RBP17.52■□□□□ 0.4
PBX3-205ENST00000373492 ARF3P61204 181 aaPredicted RBP17.52■□□□□ 0.4
PBX3-205ENST00000373492 MEF2AQ02078 507 aaPredicted RBP17.52■□□□□ 0.4
PBX3-205ENST00000373492 CASP8Q14790 479 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 FAM214AQ32MH5 1076 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 YOD1Q5VVQ6 348 aaPredicted RBP17.52■□□□□ 0.4
PBX3-205ENST00000373492 ATG9BQ674R7 924 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 PLD3Q8IV08 490 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 SLC22A9Q8IVM8 553 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 OR4N4Q8N0Y3 316 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 KRT78Q8N1N4 520 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 TMEM151AQ8N4L1 468 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 TEX9Q8N6V9 391 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 CCDC63Q8NA47 563 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 ZNF285Q96NJ3 590 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 EHD1Q9H4M9 534 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 MID2Q9UJV3 735 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 ASB1Q9Y576 335 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 NBEAQ8NFP9 2946 aa17.52■□□□□ 0.4
PBX3-205ENST00000373492 A8MT66 165 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 OR1F1O43749 312 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 SIX3O95343 332 aaPredicted RBP17.51■□□□□ 0.39
PBX3-205ENST00000373492 WT1P19544 449 aaPredicted RBP17.51■□□□□ 0.39
PBX3-205ENST00000373492 ATP5F1P24539 256 aaPredicted RBP17.51■□□□□ 0.39
PBX3-205ENST00000373492 REEP5Q00765 189 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 IRF8Q02556 426 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 LAPTM5Q13571 262 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 GTF2H2Q13888 395 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 XKR6Q5GH73 641 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 PRAMEF17Q5VTA0 474 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 GTF2H2CQ6P1K8 395 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 SLCO4C1Q6ZQN7 724 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 CSNK1A1LQ8N752 337 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 BANPQ8N9N5 519 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 MFSD9Q8NBP5 474 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 CCDC126Q96EE4 140 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 RNF31Q96EP0 1072 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 PTCD3Q96EY7 689 aaKnown RBP17.51■□□□□ 0.39
PBX3-205ENST00000373492 SLC45A3Q96JT2 553 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 LRFN5Q96NI6 719 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 SARGQ9BW04 601 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 PITHD1Q9GZP4 211 aaPredicted RBP17.51■□□□□ 0.39
PBX3-205ENST00000373492 STMN4Q9H169 189 aaPredicted RBP17.51■□□□□ 0.39
PBX3-205ENST00000373492 LHX9Q9NQ69 397 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 ENAMQ9NRM1 1142 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 STARD5Q9NSY2 213 aa17.51■□□□□ 0.39
PBX3-205ENST00000373492 LOC400499M0QZD8 3231 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 MGAQ8IWI9 3026 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 FITM1A5D6W6 292 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 ERVH48-1M5A8F1 160 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 E2F3O00716 465 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 PROCP04070 461 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 CTSBP07858 339 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 MYL2P10916 166 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 VARSP26640 1264 aaKnown RBP17.5■□□□□ 0.39
PBX3-205ENST00000373492 BCL6P41182 706 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 NFKB2Q00653 900 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 CHIT1Q13231 466 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 RBBP5Q15291 538 aaKnown RBP17.5■□□□□ 0.39
PBX3-205ENST00000373492 HIST2H2ACQ16777 129 aaPredicted RBP17.5■□□□□ 0.39
PBX3-205ENST00000373492 PAGE2BQ5JRK9 111 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 HIST2H2AA3Q6FI13 130 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 RHBDD2Q6NTF9 364 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 CAMKVQ8NCB2 501 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 LSM14AQ8ND56 463 aaKnown RBP17.5■□□□□ 0.39
PBX3-205ENST00000373492 RDH11Q8TC12 318 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 PGM2Q96G03 612 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 WBP1Q96G27 269 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 EFCAB11Q9BUY7 163 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 CUTCQ9NTM9 273 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 GEMIN8Q9NWZ8 242 aaKnown RBP17.5■□□□□ 0.39
PBX3-205ENST00000373492 KCND3Q9UK17 655 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 RALYQ9UKM9 306 aaKnown RBP17.5■□□□□ 0.39
PBX3-205ENST00000373492 EMCNQ9ULC0 261 aa17.5■□□□□ 0.39
PBX3-205ENST00000373492 HYKKA2RU49 373 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 LRRC14BA6NHZ5 514 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 ZNF891A8MT65 544 aaPredicted RBP17.49■□□□□ 0.39
PBX3-205ENST00000373492 C21orf140B9A014 251 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 LCMT2O60294 686 aaKnown RBP17.49■□□□□ 0.39
PBX3-205ENST00000373492 PLIN3O60664 434 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 SPAG7O75391 227 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 SLC35G6P0C7Q6 338 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
PBX3-205ENST00000373492 AGXTP21549 392 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 ALAS2P22557 587 aa17.49■□□□□ 0.39
PBX3-205ENST00000373492 AHRP35869 848 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms