RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 RNF130Q86XS8 419 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 OR52E4Q8NGH9 312 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 CANT1Q8WVQ1 401 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 UFD1Q92890 307 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 FBRSL1Q9HCM7 1045 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 LTBP3Q9NS15 1303 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 OR6C74A6NCV1 312 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 HEXBP07686 556 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 FHP07954 510 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF865P0CJ78 1059 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 RPP38P78345 283 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 SPANXN4Q5MJ08 99 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 NSUN5Q96P11 429 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 TRIM2Q9C040 744 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 FARSBQ9NSD9 589 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 DNAJB9Q9UBS3 223 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 RBMX2Q9Y388 322 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 SMIM30A4D0T7 59 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 IGLON5A6NGN9 336 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 SCGNO76038 276 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 HSD11B1P28845 292 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TGFBR2P37173 567 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 MLLT1Q03111 559 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF267Q14586 743 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 POP5Q969H6 163 aaKnown RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF347Q96SE7 839 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 CGREF1Q99674 301 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TRPV5Q9NQA5 729 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 PCDHGA3Q9Y5H0 932 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 AKAP12Q02952 1782 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 DUXAA6NLW8 204 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF20P17024 532 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ACSL1P33121 698 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 RPS6KA3P51812 740 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 FAM92BQ6ZTR7 304 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TRIM63Q969Q1 353 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TAS2R1Q9NYW7 299 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 OAZ3Q9UMX2 235 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 PTGDR2Q9Y5Y4 395 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 PRKACGP22612 351 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 OR1E2P47887 323 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 DLG1Q12959 904 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 RABL3Q5HYI8 236 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TP53INP2Q8IXH6 220 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 BAZ2AQ9UIF9 1905 aaKnown RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 A0A1W2PQ72 361 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TGM5O43548 720 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF432O94892 652 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 WDR45BQ5MNZ6 344 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ARMC10Q8N2F6 343 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TXNDC5Q8NBS9 432 aaKnown RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TTYH2Q9BSA4 534 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 CD244Q9BZW8 370 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 XYLT2Q9H1B5 865 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF879B4DU55 563 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 IL33O95760 270 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 ITGB1P05556 798 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 MAGEA11P43364 429 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 LACTB2Q53H82 288 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TTLL10Q6ZVT0 673 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 SLCO3A1Q9UIG8 710 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 OR1A2Q9Y585 309 aa12.51□□□□□ -0.41
PTPRK-207ENST00000368226 MPZL2O60487 215 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CBSLP0DN79 551 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CBSP35520 551 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 AP1S2P56377 157 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 FRMD7Q6ZUT3 714 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 ADAD1Q96M93 576 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 FRMD6Q96NE9 622 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 GPR22Q99680 433 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 DERL2Q9GZP9 239 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 PIGUQ9H490 435 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 DKKL1Q9UK85 242 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 HCN2Q9UL51 889 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 PEX12O00623 359 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 AREL1O15033 823 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CYB5AP00167 134 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF3P17036 446 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 EDNRAP25101 427 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 OR12D2P58182 307 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF676Q8N7Q3 588 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 THEM6Q8WUY1 208 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 TMBIM1Q969X1 311 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 WDR77Q9BQA1 342 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CHIAQ9BZP6 476 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 POLR2J2Q9GZM3 115 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 DLGAP4Q9Y2H0 992 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 PMF1-BGLAPU3KQ54 211 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms