RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CASTOR1Q8WTX7 329 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ZBTB45Q96K62 511 aaPredicted RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF578Q96N58 590 aaPredicted RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 EIF2B4Q9UI10 523 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 KLF15Q9UIH9 416 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 BLKP51451 505 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MRPL49Q13405 166 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 UGT8Q16880 541 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MOAP1Q96BY2 351 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 FCRL2Q96LA5 508 aaPredicted RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ACTR3BQ9P1U1 418 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MSRAQ9UJ68 235 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 PORP16435 677 aaPredicted RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CD79BP40259 229 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 FXYD6P3P58550 94 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 HNRNPA0Q13151 305 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ACO2Q99798 780 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SLC6A7Q99884 636 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CCDC163A0A0D9SF12 145 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 RNASEH2AO75792 299 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 C2orf76Q3KRA6 126 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 LRRC58Q96CX6 371 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 C17orf113A0A1B0GUU1 675 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 C2orf74A8MZ97 194 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM150CB9EJG8 249 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 HCRTR2O43614 444 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MFSD11O43934 449 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 BCHEP06276 602 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ACTBP60709 375 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ACTG1P63261 375 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 DSC3Q14574 896 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 PAOXQ6QHF9 649 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ZCCHC10Q8TBK6 192 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SMPDL3BQ92485 455 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ARL6Q9H0F7 186 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MIA3Q5JRA6 1907 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CEP170BQ9Y4F5 1589 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 C12orf71A8MTZ7 269 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 DNM1LO00429 736 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 PCDH7O60245 1069 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 NOMO1Q15155 1222 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SEC61A2Q9H9S3 476 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF638Q14966 1978 aaKnown RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 YDJCA8MPS7 323 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 NTSR2O95665 410 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 S1PR1P21453 382 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CCDC58Q4VC31 144 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 KANK2Q63ZY3 851 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 TOP6BLQ8N6T0 577 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 OR56B2PQ8NGI1 322 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CHRAC1Q9NRG0 131 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CENPMQ9NSP4 180 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CDH15P55291 814 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 C9orf57Q5W0N0 161 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SLC22A10Q63ZE4 541 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 TRAPPC12Q8WVT3 735 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SLA2Q9H6Q3 261 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SLC7A11Q9UPY5 501 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CDKN2BP42772 138 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ALDH3B1P43353 468 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 PXKQ7Z7A4 578 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SKA3Q8IX90 412 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 MRPL41Q8IXM3 137 aaKnown RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 LNX1Q8TBB1 728 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 OR4K3Q96R72 315 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SLC25A51Q9H1U9 297 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 BRF2Q9HAW0 419 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF334Q9HCZ1 680 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZFP57Q9NU63 452 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZIM2Q9NZV7 527 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 GMDSO60547 372 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 RAB31Q13636 194 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF460Q14592 562 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 PDSS1Q5T2R2 415 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FANK1Q8TC84 345 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 NME7Q9Y5B8 376 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 INMT-MINDY4F8WBC2 141 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 DNASE1P24855 282 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CORO1AP31146 461 aaKnown RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 VEGFCP49767 419 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SCNN1GP51170 649 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 C14orf28Q4W4Y0 310 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CFAP52Q8N1V2 620 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 TMBIM1Q969X1 311 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 HYLS1Q96M11 299 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ATG5Q9H1Y0 275 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ADRB2P07550 413 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CD3GP09693 182 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ALPPL2P10696 532 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 EEFSECP57772 596 aaKnown RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 GLT8D1Q68CQ7 371 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF808Q8N4W9 903 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CYP2S1Q96SQ9 504 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CDK5RAP2Q96SN8 1893 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 GNRHRP30968 328 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FRKP42685 505 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 TAS2R40P59535 323 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CDK3Q00526 305 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms