RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SLC26A11Q86WA9 606 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 ZBED8Q8IZ13 594 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 THOC3Q96J01 351 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 RUNDC3BQ96NL0 473 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 YIPF2Q9BWQ6 316 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 DRC3Q9H069 523 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 CAB39LQ9H9S4 337 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 ASF1BQ9NVP2 202 aa15.86■□□□□ 0.13
PDLIM7-201ENST00000355572 CNTRLQ7Z7A1 2325 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 HIVEP3Q5T1R4 2406 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 C4orf51C9J302 202 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 PAFAH1B1P43034 410 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 OCA2Q04671 838 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 PCOLCEQ15113 449 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 UBAP2Q5T6F2 1119 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 GARNL3Q5VVW2 1013 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 DUPD1Q68J44 220 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 LRRC8EQ6NSJ5 796 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 TMEM214Q6NUQ4 689 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 IGFL2Q6UWQ7 119 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 Q6ZS92 163 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 LANCL3Q6ZV70 420 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 C17orf64Q86WR6 236 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 CISD2Q8N5K1 135 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 RERGQ96A58 199 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 FBXL8Q96CD0 374 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 MVB12AQ96EY5 273 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 ARL15Q9NXU5 204 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 HCN3Q9P1Z3 774 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 ZFATQ9P243 1243 aa15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 MTO1Q9Y2Z2 717 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-201ENST00000355572 KCNE1BA0A087WTH5 132 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 IGHV1-45A0A0A0MS14 117 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 IGHV3-20A0A0C4DH32 117 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 ZNF860A6NHJ4 632 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 SGK494L7N484 410 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 SEMA7AO75326 666 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 BMP10O95393 424 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 HPP00738 406 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 ACPPP15309 386 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 EMP2P54851 167 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 GPX6P59796 221 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 HIST2H2BCQ6DN03 193 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 ZDHHC24Q6UX98 284 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 SYT10Q6XYQ8 523 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 SPATA6LQ8N4H0 392 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 GALNT11Q8NCW6 608 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 CATSPER1Q8NEC5 780 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 OR4K1Q8NGD4 311 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 OR5T3Q8NGG3 340 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 NEIL2Q969S2 332 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 NACC2Q96BF6 587 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 PDLIM5Q96HC4 596 aaKnown RBP15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 VPS39Q96JC1 886 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 ERP44Q9BS26 406 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 RBCK1Q9BYM8 510 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 TGIF2Q9GZN2 237 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 SAYSD1Q9NPB0 183 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 SLAMF7Q9NQ25 335 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 CORO1CQ9ULV4 474 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 B3GNT3Q9Y2A9 372 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 PCDHGA10Q9Y5H3 936 aa15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 USP9XQ93008 2570 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-201ENST00000355572 A0A1W2PQ72 361 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 MAP2K7O14733 419 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 RDH16O75452 317 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 IGHEP01854 428 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 RPS15AP62244 130 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 FAM53BQ14153 422 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 EIF2S3LQ2VIR3 472 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 FBXO48Q5FWF7 155 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 B3GNTL1Q67FW5 361 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 TMEM205Q6UW68 189 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 LINC00696Q6ZRV3 163 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 ASPGQ86U10 573 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 MFSD9Q8NBP5 474 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 ABHD11Q8NFV4 315 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 TSNARE1Q96NA8 513 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 VN1R1Q9GZP7 353 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 LHPPQ9H008 270 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 MKKSQ9NPJ1 570 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 MKL2Q9ULH7 1088 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 CDC14AQ9UNH5 594 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 NOVA2Q9UNW9 492 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 ZGRF1Q86YA3 2104 aa15.83■□□□□ 0.12
PDLIM7-201ENST00000355572 ICE1Q9Y2F5 2266 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 LOC102723996A0A087X1L8 192 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 FAM187AA6NFU0 413 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 PHGDHO43175 533 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 PRAMEF4O60810 478 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 FAM155BO75949 473 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 NSA2O95478 260 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 F10P00742 488 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 PRR35P0CG20 571 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 ITGAMP11215 1152 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 SOX11P35716 441 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 GDF5P43026 501 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 ST13P50502 369 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 OLR1P78380 273 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms