RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 Q7L0L9 218 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 C10orf111Q8N326 155 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 TMEM102Q8N9M5 508 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 ANKRD53Q8N9V6 530 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 DENND6BQ8NEG7 585 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 ITCHQ96J02 903 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 RPF2Q9H7B2 306 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 RMND5AQ9H871 391 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 AK5Q9Y6K8 562 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 ARHGAP10A1A4S6 786 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 RASGRP1O95267 797 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 PIM1P11309 404 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 HTR1BP28222 390 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 HTR1EP28566 365 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 AMIGO2Q86SJ2 522 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 KRT78Q8N1N4 520 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 TOE1Q96GM8 510 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 TRIM15Q9C019 465 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 POLMQ9NP87 494 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 USP36Q9P275 1121 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 ERVK-11Q9UQG0 969 aa21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 NUP214P35658 2090 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-203ENST00000339162 TRBV5-3A0A0A0MS03 114 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 DHRS12A0PJE2 317 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 AQP12BA6NM10 295 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 GABRR3A8MPY1 467 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 RFXANKO14593 260 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 TPST1O60507 370 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 PTPN6P29350 595 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 WNT3P56703 355 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 CYP51A1Q16850 503 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 GLYATQ6IB77 296 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 ZNF852Q6ZMS4 543 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 ADCK2Q7Z695 626 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 PDSS2Q86YH6 399 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 AQP12AQ8IXF9 295 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 CLECL1Q8IZS7 167 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 DTWD1Q8N5C7 304 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 RLN3Q8WXF3 142 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 HLA-CQ95604 372 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 PPWD1Q96BP3 646 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 LMAN1LQ9HAT1 526 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 ICKQ9UPZ9 632 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 TBX6O95947 436 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 IGHV4-34P06331 123 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 HOXC4P09017 264 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 MTAPQ13126 283 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 GAS6Q14393 721 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 Q6ZSR6 202 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 RAB42Q8N4Z0 105 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 FAM160A2Q8N612 972 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 UBE2E3Q969T4 207 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 METTL2AQ96IZ6 378 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 MAN2B2Q9Y2E5 1009 aa21.53■■□□□ 1.04
PDLIM2-203ENST00000339162 A0A096LPI6 279 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 SCAMP2O15127 329 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 KCNJ13O60928 360 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 ERN1O75460 977 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 KLK1P06870 262 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 IL9P15248 144 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 AKT2P31751 481 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 ACTR1BP42025 376 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 PIK3CBP42338 1070 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 CCR8P51685 355 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 ACTR1AP61163 376 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 TBCELQ5QJ74 424 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 LRIF1Q5T3J3 769 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 OR2T12Q8NG77 320 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 OR2A1Q8NGT9 310 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 DUS3LQ96G46 650 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 GBP5Q96PP8 586 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 PANX1Q96RD7 426 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 AIF1LQ9BQI0 150 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 EXO1Q9UQ84 846 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 INVSQ9Y283 1065 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 DTNAQ9Y4J8 743 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 PCDHB3Q9Y5E6 796 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 GON4LQ3T8J9 2241 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 IGKV1-8A0A0C4DH67 115 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 ANKDD1BA6NHY2 528 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 SCN2BO60939 215 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 CPSF4O95639 269 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 PKLRP30613 574 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 DGKEP52429 567 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 MC1RQ01726 317 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 SRSF11Q05519 484 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 SLC14A1Q13336 389 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 PTCRAQ6ISU1 281 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 HMBOX1Q6NT76 420 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 ABHD11Q8NFV4 315 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 OR13H1Q8NG92 308 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 MSANTD3Q96H12 275 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 GPR174Q9BXC1 333 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 TPSD1Q9BZJ3 242 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 PCBD2Q9H0N5 130 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 VCX3BQ9H321 246 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 WASH6PQ9NQA3 447 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 CCM2LQ9NUG4 571 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 SH3BP4Q9P0V3 963 aa21.52■■□□□ 1.04
PDLIM2-203ENST00000339162 GOLGA4Q13439 2230 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms