RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CUZD1Q86UP6 607 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CLEC4FQ8N1N0 589 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 REPS1Q96D71 796 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 REXO5Q96IC2 774 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 ZNF556Q9HAH1 456 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 ADGRE2Q9UHX3 823 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 E7ENX8 843 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 OR7A17O14581 309 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 NUDT21O43809 227 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 VPS4BO75351 444 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 OR6A2O95222 327 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 EML2O95834 649 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 LMNAP02545 664 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CELA2BP08218 269 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 PCSK2P16519 638 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 DRD4P21917 467 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CCNG1P51959 295 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 ESRRGP62508 458 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 TAP2Q03519 686 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 TRAF3Q13114 568 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 FLOT2Q14254 428 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 NR0B2Q15466 257 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CYP51A1Q16850 503 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 MBOAT1Q6ZNC8 495 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 GPRIN3Q6ZVF9 776 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 AMIGO1Q86WK6 493 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SUMF1Q8NBK3 374 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 METTL6Q8TCB7 284 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 HGH1Q9BTY7 390 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 PPT2Q9UMR5 302 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SPG11Q96JI7 2443 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 ALPK2Q86TB3 2170 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 A0A1W2PPV9 198 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 NPIPB8E9PQR5 432 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 ERN1O75460 977 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 UROSP10746 265 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC19A1P41440 591 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 HSPA7P48741 367 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 INHBCP55103 352 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SQSTM1Q13501 440 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 TERF2Q15554 542 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 PTCHD3Q3KNS1 767 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 PRAMEF13Q5VWM6 474 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 GRHL2Q6ISB3 625 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 TMEM26Q6ZUK4 368 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 OR9Q1Q8NGQ5 310 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 UBE2E3Q969T4 207 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 RERGQ96A58 199 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SARGQ9BW04 601 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CHRNA10Q9GZZ6 450 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 USE1Q9NZ43 259 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 KCNE1BA0A087WTH5 132 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 AGTR2P50052 363 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 HHEXQ03014 270 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 CCSMST1Q4G0I0 132 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 GATAD2AQ86YP4 633 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 TEX9Q8N6V9 391 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 TRIML2Q8N7C3 387 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 PIWIL2Q8TC59 973 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC37A2Q8TED4 501 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC5A11Q8WWX8 675 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 FAM162AQ96A26 154 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 LRRC37BQ96QE4 947 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 EFCAB11Q9BUY7 163 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 NPHS2Q9NP85 383 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ENAMQ9NRM1 1142 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ZFP69BQ9UJL9 534 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 OR52A4PA6NMU1 304 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 FFAR3O14843 346 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 GPR42O15529 346 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ITM2AO43736 263 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 CLDN9O95484 217 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 CHRM5P08912 532 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 GIMD1P0DJR0 217 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 EPORP19235 508 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 KCNK10P57789 538 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ACSM2AQ08AH3 577 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ZXDCQ2QGD7 858 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ARL13AQ5H913 290 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 PAGE2BQ5JRK9 111 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ACSM2BQ68CK6 577 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ZCCHC23Q6ZST2 131 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC25A45Q8N413 288 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 KYQ8NBH2 561 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 LCN9Q8WX39 176 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 PTCD3Q96EY7 689 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 GAREM1Q9H706 876 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 MEAF6Q9HAF1 191 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 MRGBPQ9NV56 204 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 KCNE2Q9Y6J6 123 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 B4DGG1 531 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 PROB1E7EW31 1015 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 SIX3O95343 332 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 HGFP14210 728 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 JUPP14923 745 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 GNAZP19086 355 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 PRPH2P23942 346 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms