RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 MEAF6Q9HAF1 191 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 ADAMTS6Q9UKP5 1117 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 GRIP1Q9Y3R0 1128 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 H0YJX3 145 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 KCNC4Q03721 635 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 NIPAL4Q0D2K0 466 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 ST3GAL3Q11203 375 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 KCNC3Q14003 757 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 TSTQ16762 297 aaKnown RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 SIX5Q8N196 739 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 MINDY1Q8N5J2 469 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 KLK6Q92876 244 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 IL12RB2Q99665 862 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 C11orf84Q9BUA3 381 aaPredicted RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 OR51B5Q9H339 312 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 EXO5Q9H790 373 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 B4GALT6Q9UBX8 382 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 RNF6Q9Y252 685 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 SCAMP1O15126 338 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 DFNA5O60443 496 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 SNNO75324 88 aaPredicted RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 DNAJB5O75953 348 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 BEST1O76090 585 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 RCBTB2O95199 551 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 PEPDP12955 493 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ZNF823P16415 610 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 GJA1P17302 382 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ARCN1P48444 511 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 ADAM8P78325 824 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TLE2Q04725 743 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ZNF763Q0D2J5 394 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ZNF252P-AS1Q0IIN9 211 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 MMAAQ8IVH4 418 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 ZDHHC14Q8IZN3 488 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.43□□□□□ -0.74
CD44-201ENST00000263398 TMEM203Q969S6 136 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 RANBP9Q96S59 729 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 MND1Q9BWT6 205 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 PREBQ9HCU5 417 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 AASSQ9UDR5 926 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 JUNP05412 331 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 ACVR2AP27037 513 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 CBX5P45973 191 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 BDKRB1P46663 353 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ENTPD1P49961 510 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 BLKP51451 505 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 CLCN2P51788 898 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 RPS13P62277 151 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 CSTF1Q05048 431 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 PTGR1Q14914 329 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 UPP1Q16831 310 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 SWI5Q1ZZU3 235 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 PLEKHS1Q5SXH7 462 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 PRPF38BQ5VTL8 546 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 SLC8B1Q6J4K2 584 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 HACD2Q6Y1H2 254 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 SLITRK4Q8IW52 837 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TMEM145Q8NBT3 493 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 SLC5A11Q8WWX8 675 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 NCSTNQ92542 709 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 NSUN5Q96P11 429 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 CARS2Q9HA77 564 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 TDP1Q9NUW8 608 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 AIG1Q9NVV5 245 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TAF1P21675 1872 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 MID1O15344 667 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 MAFKO60675 156 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ZNF623O75123 536 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ZNF182P17025 639 aaPredicted RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 GNALP38405 381 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 CLCN7P51798 805 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TMBIM6P55061 237 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TXNL4AP83876 142 aaKnown RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 SOX4Q06945 474 aaPredicted RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 NFATC2Q13469 925 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 GRB7Q14451 532 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 GPR68Q15743 365 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 WSCD2Q2TBF2 565 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 CEP97Q8IW35 865 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 AUTS2Q8WXX7 1259 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 OVCA2Q8WZ82 227 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ISOC1Q96CN7 298 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TBX5Q99593 518 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 MARK1Q9P0L2 795 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 GPN3Q9UHW5 284 aaPredicted RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 MKL2Q9ULH7 1088 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 DLGAP4Q9Y2H0 992 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 MED31Q9Y3C7 131 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 PCDHB3Q9Y5E6 796 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 TLX2O43763 284 aaPredicted RBP10.43□□□□□ -0.74
CD44-201ENST00000263398 SNAP29O95721 258 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 LINGO3P0C6S8 592 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 AKR1D1P51857 326 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 C6orf141Q5SZD1 244 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 REEP3Q6NUK4 255 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 ZNF783Q6ZMS7 281 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 PRR23CQ6ZRP0 262 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 Q6ZVL8 140 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 LINGO2Q7L985 606 aa10.43□□□□□ -0.74
CD44-201ENST00000263398 CYB5D2Q8WUJ1 264 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms