RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 NELFEP18615 380 aaKnown RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 C5AR1P21730 350 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 PEX19P40855 299 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ALDH3A2P51648 485 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ARSFP54793 590 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 TAS2R38P59533 333 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 LRRC74AQ0VAA2 488 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ENPP2Q13822 863 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 NKG7Q16617 165 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 WSCD2Q2TBF2 565 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 PRAMEF14Q5SWL7 426 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 PRAMEF13Q5VWM6 474 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ERICH5Q6P6B1 374 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 GALNT18Q6P9A2 607 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 TTC33Q6PID6 262 aaPredicted RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ZDHHC13Q8IUH4 622 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 EID3Q8N140 333 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 CLEC4FQ8N1N0 589 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 ZNF513Q8N8E2 541 aaPredicted RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 OR5AR1Q8NGP9 310 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 TFGQ92734 400 aaPredicted RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 SH3KBP1Q96B97 665 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 CXorf40BQ96DE9 158 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 DMRT3Q9NQL9 472 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 TDRKHQ9Y2W6 561 aaKnown RBP12.46□□□□□ -0.42
SPTLC1-201ENST00000262554 G3V2T6 193 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 H0YAE9 185 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 KMOO15229 486 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 LINC01565O15544 149 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 SNAP29O95721 258 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 ALBP02768 609 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 PPIBP23284 216 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 PIK3CBP42338 1070 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 MAGEA10P43363 369 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 ZNF763Q0D2J5 394 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 SLC14A1Q13336 389 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 DAG1Q14118 895 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 AGERQ15109 404 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 RBBP5Q15291 538 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 NADK2Q4G0N4 442 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 CYBRD1Q53TN4 286 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 ANKRD26P1Q6NSI1 321 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 ZCCHC8Q6NZY4 707 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 TBPL2Q6SJ96 375 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 LCTLQ6UWM7 567 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 STK32CQ86UX6 486 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 ADHFE1Q8IWW8 467 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 CLECL1Q8IZS7 167 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 SVOPLQ8N434 492 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 HDDC3Q8N4P3 179 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 OXR1Q8N573 874 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 COQ8BQ96D53 544 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 DGCR14Q96DF8 476 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 PYURFQ96I23 114 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 LGR4Q9BXB1 951 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 AASDHPPTQ9NRN7 309 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 SLC23A2Q9UGH3 650 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 SAMD4AQ9UPU9 718 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 CORO2BQ9UQ03 480 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 PCDHB11Q9Y5F2 797 aa12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 PCYT1BQ9Y5K3 369 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1-201ENST00000262554 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 GPR89AB7ZAQ6 455 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 HPRP00739 348 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 GPR89BP0CG08 455 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 IDSP22304 550 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 HSD17B2P37059 387 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 MEF2AQ02078 507 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 VAC14Q08AM6 782 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 ARHGAP19Q14CB8 494 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 CYP2A13Q16696 494 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 KCTD21Q4G0X4 260 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 METRNLQ641Q3 311 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 CPZQ66K79 652 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 CES5AQ6NT32 575 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 PARM1Q6UWI2 310 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 ABRAXAS1Q6UWZ7 409 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 COMMD6Q7Z4G1 85 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 KRT78Q8N1N4 520 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 ZNF786Q8N393 782 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 ZCCHC7Q8N3Z6 543 aaKnown RBP12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 METTL25Q8N6Q8 603 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 LMNTD1Q8N9Z9 388 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 OR5K2Q8NHB8 316 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 FBXL20Q96IG2 436 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 TRMT61BQ9BVS5 477 aaKnown RBP12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 SPATA9Q9BWV2 254 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 TEX101Q9BY14 249 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 WDR26Q9H7D7 661 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 SLC28A3Q9HAS3 691 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 SH3BP4Q9P0V3 963 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 ATP6V1HQ9UI12 483 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 PLAGL1Q9UM63 463 aa12.44□□□□□ -0.42
SPTLC1-201ENST00000262554 TSC22D4Q9Y3Q8 395 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms