RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 KLC1Q07866 573 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 FAM53BQ14153 422 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 C18orf21Q32NC0 220 aaPredicted RBP21.81■■□□□ 1.08
LSM4-201ENST00000252816 LAPTM4BQ86VI4 370 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 THOC6Q86W42 341 aaKnown RBP21.81■■□□□ 1.08
LSM4-201ENST00000252816 MFSD9Q8NBP5 474 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 ZNF740Q8NDX6 193 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 KIF18AQ8NI77 898 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 NACC2Q96BF6 587 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 MIEF2Q96C03 454 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 MMABQ96EY8 250 aaPredicted RBP21.81■■□□□ 1.08
LSM4-201ENST00000252816 FER1L6-AS2Q96M78 137 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 EGFL8Q99944 293 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 MESP1Q9BRJ9 268 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 NUDT9Q9BW91 350 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 SPNS1Q9H2V7 528 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 TRPC4Q9UBN4 977 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 ANAPC2Q9UJX6 822 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 SLC22A14Q9Y267 594 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 TENM4Q6N022 2769 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 AGPSO00116 658 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 CD1DP15813 335 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 GRK3P35626 688 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 KLRB1Q12918 225 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 NAB1Q13506 487 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 RAPSNQ13702 412 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 TGFBIQ15582 683 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 OR4D1Q15615 310 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 NDUFA9Q16795 377 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 SYT16Q17RD7 645 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 TMEM214Q6NUQ4 689 aaKnown RBP21.8■■□□□ 1.08
LSM4-201ENST00000252816 KIRREL2Q6UWL6 708 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 FRA10AC1Q70Z53 315 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 PRSS41Q7RTY9 318 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 CMC1Q7Z7K0 106 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 ASPGQ86U10 573 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 SLC5A11Q8WWX8 675 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 RHBDF1Q96CC6 855 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 UBXN10Q96LJ8 280 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 CRB3Q9BUF7 120 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 SARGQ9BW04 601 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 EPN3Q9H201 632 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 NINJ2Q9NZG7 142 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 FBXL4Q9UKA2 621 aa21.8■■□□□ 1.08
LSM4-201ENST00000252816 ECHS1P30084 290 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 CASRP41180 1078 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 GDF5P43026 501 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 HNMTP50135 292 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 MAT1AQ00266 395 aaKnown RBP21.79■■□□□ 1.08
LSM4-201ENST00000252816 CSHL1Q14406 222 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 SLMAPQ14BN4 828 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 RELL1Q8IUW5 271 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 SHISA5Q8N114 240 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 KCT2Q8NC54 265 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 CAMKVQ8NCB2 501 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 OR9A4Q8NGU2 314 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 SLC13A3Q8WWT9 602 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 IFT81Q8WYA0 676 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 YIPF2Q9BWQ6 316 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 FAM129AQ9BZQ8 928 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 SEMA3GQ9NS98 782 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 MTRF1LQ9UGC7 380 aaKnown RBP21.79■■□□□ 1.08
LSM4-201ENST00000252816 C3orf18Q9UK00 162 aa21.79■■□□□ 1.08
LSM4-201ENST00000252816 SPENQ96T58 3664 aaKnown RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 TRBC2A0A5B9 178 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 NCF1BA6NI72 391 aaPredicted RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 NCF1CA8MVU1 366 aaPredicted RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 PRPF4O43172 522 aaKnown RBP eCLIP21.78■■□□□ 1.08
LSM4-201ENST00000252816 OR1F1O43749 312 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 ALOX12BO75342 701 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 IGHEP01854 428 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 SLC35E2BP0CK96 405 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 NCF1P14598 390 aaPredicted RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 SLC6A12P48065 614 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 ATP6V0D1P61421 351 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 TLE1Q04724 770 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 DLG1Q12959 904 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 RBBP7Q16576 425 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 GLE1Q53GS7 698 aaKnown RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 NXPE4Q6UWF7 544 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 KLHDC8AQ8IYD2 350 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 GALNT16Q8N428 558 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 TEX19Q8NA77 164 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 CLEC1AQ8NC01 280 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 ZCCHC10Q8TBK6 192 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 TRIM44Q96DX7 344 aaPredicted RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 MRRFQ96E11 262 aaKnown RBP21.78■■□□□ 1.08
LSM4-201ENST00000252816 MOCOSQ96EN8 888 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 GPR83Q9NYM4 423 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 DYRK1BQ9Y463 629 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 MAP4K5Q9Y4K4 846 aa21.78■■□□□ 1.08
LSM4-201ENST00000252816 HMX2A2RU54 273 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 TAPBPO15533 448 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 IL1RNP18510 177 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 KCNC1P48547 511 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 REEP5Q00765 189 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 TMPRSS11BQ86T26 416 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 GPSM1Q86YR5 675 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 ZC3H7AQ8IWR0 971 aaKnown RBP21.77■■□□□ 1.08
LSM4-201ENST00000252816 OR11G2Q8NGC1 345 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms