RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 KEAP1Q14145 624 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 RFX4Q33E94 735 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 MAJINQ3KP22 176 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 GRASPQ7Z6J2 395 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 TMEM179BQ7Z7N9 219 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 TSPAN33Q86UF1 283 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 ANKRD46Q86W74 232 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 ZDHHC13Q8IUH4 622 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 FNDC8Q8TC99 324 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 WDR34Q96EX3 536 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 VPS35Q96QK1 796 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 TRIT1Q9H3H1 467 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 TOR3AQ9H497 397 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 PLGRKTQ9HBL7 147 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 DLGAP4Q9Y2H0 992 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 PCDHGB6Q9Y5F9 930 aa6.95□□□□□ -1.3
CTNNA1-244ENST00000627109 VCANP13611 3396 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 G3V2T6 193 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 NOBOXO60393 691 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PSIP1O75475 530 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CCDC159P0C7I6 412 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 HSD3B1P14060 373 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SDC1P18827 310 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 DCTP40126 519 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 GSSP48637 474 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SPINT3P49223 89 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PFN3P60673 137 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 TFF2Q03403 129 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 HSPA14Q0VDF9 509 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CTU2Q2VPK5 515 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 LRRC73Q5JTD7 316 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 LIPJQ5W064 366 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 NEK5Q6P3R8 708 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 C22orf39Q6P5X5 142 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SLC16A12Q6ZSM3 486 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CCDC149Q6ZUS6 474 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SPARTQ8N0X7 666 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 KRTCAP2Q8N6L1 136 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 FBXO15Q8NCQ5 510 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF555Q8NEP9 628 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 BPIFB6Q8NFQ5 453 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ITCHQ96J02 903 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ZBP1Q9H171 429 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ADGRE2Q9UHX3 823 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 INVSQ9Y283 1065 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 B3GNT3Q9Y2A9 372 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 TMEM229AB2RXF0 380 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 MAN1A2O60476 641 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 XYLBO75191 536 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 KRT6AP02538 564 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 KRT6BP04259 564 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 JUPP14923 745 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF30P17039 623 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 MATN1P21941 496 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 GABRR2P28476 465 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PIGAP37287 484 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 KRT6CP48668 564 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 IST1P53990 364 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CAMK1Q14012 370 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CPZQ66K79 652 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 LRRC66Q68CR7 880 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 KDM4DQ6B0I6 523 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ANKRD26P1Q6NSI1 321 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 XKR5Q6UX68 686 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ARL14EPQ8N8R7 260 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 DDHD1Q8NEL9 900 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ITFG2Q969R8 447 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 HSPBAP1Q96EW2 488 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PYURFQ96I23 114 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 MAGED4Q96JG8 741 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 TSSK3Q96PN8 268 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PITX2Q99697 317 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SUV39H2Q9H5I1 410 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 BRF2Q9HAW0 419 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 FAM86C1Q9NVL1 165 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 HCFC1R1Q9NWW0 138 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 DPP7Q9UHL4 492 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 MKL2Q9ULH7 1088 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SNX6Q9UNH7 406 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 TSC22D4Q9Y3Q8 395 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PCDHGA8Q9Y5G5 932 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ATG2AQ2TAZ0 1938 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 C1orf226A1L170 272 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 C16orf96A6NNT2 1141 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 H0YIV9 168 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 NPC1O15118 1278 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 KPNA5O15131 536 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 B4GAT1O43505 415 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CCNDBP1O95273 360 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 FKBP9O95302 570 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CST1P01037 141 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 GSTM1P09488 218 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SNRPD1P62314 119 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 GSTM4Q03013 218 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 UBE3AQ05086 875 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 DMC1Q14565 340 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ATP13A5Q4VNC0 1218 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 C6orf141Q5SZD1 244 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 BROXQ5VW32 411 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 TMEM26Q6ZUK4 368 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms