RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ZNF416Q9BWM5 594 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 RC3H2Q9HBD1 1191 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 BPIFA1Q9NP55 256 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 OLA1Q9NTK5 396 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 COA4Q9NYJ1 87 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 CD274Q9NZQ7 290 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 EIF2B4Q9UI10 523 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 ANAPC2Q9UJX6 822 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SNX6Q9UNH7 406 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 FAM92AA1XBS5 289 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 MEIOCA2RUB1 952 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 F5H5T6 163 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 EEDO75530 441 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 OR2B3O76000 313 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SLC22A5O76082 557 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 OR4F21O95013 312 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 ADORA3P0DMS8 318 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 UROSP10746 265 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SLC6A4P31645 630 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SHMT2P34897 504 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 MAP2K6P52564 334 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 NCS1P62166 190 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 BTBD16Q32M84 506 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 XKR7Q5GH72 579 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 LAMTOR1Q6IAA8 161 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 HTR3DQ70Z44 454 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 TMEM199Q8N511 208 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 CINPQ9BW66 212 aaPredicted RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 PAK1IP1Q9NWT1 392 aaPredicted RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 OPTCQ9UBM4 332 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 TLR5O60602 858 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 TSPAN12O95859 305 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 DEFA1P59665 94 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 DEFA3P59666 94 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 RPS24P62847 133 aaKnown RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 C6orf136Q5SQH8 315 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 PDSS1Q5T2R2 415 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 CST9Q5W186 159 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 TBPL2Q6SJ96 375 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 GPRIN3Q6ZVF9 776 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 EFL1Q7Z2Z2 1120 aaKnown RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 NRARPQ7Z6K4 114 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 PTRH1Q86Y79 214 aaKnown RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 GPSM1Q86YR5 675 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 NKAPQ8N5F7 415 aaKnown RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 PARP16Q8N5Y8 322 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 TTC16Q8NEE8 873 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 LPCAT1Q8NF37 534 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 OR8K5Q8NH50 307 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 TSPEARQ8WU66 669 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 SLC22A17Q8WUG5 538 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 TBC1D20Q96BZ9 403 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 LINGO1Q96FE5 620 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 HBEGFQ99075 208 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 RANBP3Q9H6Z4 567 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 SMPD3Q9NY59 655 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 FKBPLQ9UIM3 349 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 LEF1Q9UJU2 399 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 PCDHGC4Q9Y5F7 938 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ZFP37Q9Y6Q3 630 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 TP53BP1Q12888 1972 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 IQCF5A8MTL0 148 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 STX16O14662 325 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 INPPL1O15357 1258 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 FZD6O60353 706 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 MLYCDO95822 493 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 GNRH1P01148 92 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ALBP02768 609 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 GLAP06280 429 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 FCGR1AP12314 374 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 PKMP14618 531 aaKnown RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 PCMT1P22061 227 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 HRH2P25021 359 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ZNF157P51786 506 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 AKR1D1P51857 326 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ARFIP1P53367 373 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 OR4D2P58180 307 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 PLD1Q13393 1074 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 TAF1AQ15573 450 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 LRRC26Q2I0M4 334 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 C18orf21Q32NC0 220 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 XKRXQ6PP77 449 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 EFHBQ8N7U6 833 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 OR52B6Q8NGF0 335 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 OR56A4Q8NGH8 313 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ATOH1Q92858 354 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 NCLNQ969V3 563 aa12.08□□□□□ -0.48
LITAF-221ENST00000622633 ZNF300Q96RE9 604 aaPredicted RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 NUSAP1Q9BXS6 441 aaKnown RBP12.08□□□□□ -0.48
LITAF-221ENST00000622633 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms