RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SCIMPQ6UWF3 145 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 ZNF517Q6ZMY9 492 aaPredicted RBP8.48□□□□□ -1.05
PDE6A-204ENST00000613228 BPHLQ86WA6 291 aaPredicted RBP8.48□□□□□ -1.05
PDE6A-204ENST00000613228 GPR156Q8NFN8 814 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 EEF1AKMT1Q8WVE0 214 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 ANKRD49Q8WVL7 239 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 BADQ92934 168 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 ZC3H10Q96K80 434 aaKnown RBP8.48□□□□□ -1.05
PDE6A-204ENST00000613228 CFHR5Q9BXR6 569 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 TOR3AQ9H497 397 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 SYNDIG1Q9H7V2 258 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 IMP3Q9NV31 184 aaKnown RBP8.48□□□□□ -1.05
PDE6A-204ENST00000613228 CLN6Q9NWW5 311 aa8.48□□□□□ -1.05
PDE6A-204ENST00000613228 IGLV3-10A0A075B6K4 115 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 FAM155AB1AL88 458 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 RFPL2O75678 378 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 NRIP1P48552 1158 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 KHKP50053 298 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 CYP4F2P78329 520 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 OTUD3Q5T2D3 398 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 FRG2Q64ET8 278 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MZT2AQ6P582 158 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MACC1Q6ZN28 852 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 ERN2Q76MJ5 926 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 THAP5Q7Z6K1 395 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 THOC6Q86W42 341 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 C11orf65Q8NCR3 313 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SMPDL3AQ92484 453 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 FRG2BQ96QU4 278 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MNTQ99583 582 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SLC22A4Q9H015 551 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PPA2Q9H2U2 334 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 R3HDMLQ9H3Y0 253 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 FAM120CQ9NX05 1096 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 POMPQ9Y244 141 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SPO11Q9Y5K1 396 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 GRXCR2A6NFK2 248 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 TBX1O43435 398 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 AGR2O95994 175 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 NR2F1P10589 423 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 M6PRP20645 277 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 RCVRNP35243 200 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MANFP55145 182 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SPRED3Q2MJR0 410 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PLA2G4EQ3MJ16 856 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 GPRC6AQ5T6X5 926 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MANEALQ5VSG8 457 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PYHIN1Q6K0P9 492 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SLC44A2Q8IWA5 706 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SPAG16Q8N0X2 631 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 TTC29Q8NA56 475 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SIMC1Q8NDZ2 872 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 CHPT1Q8WUD6 406 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SERHLQ9NQF3 203 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 WDR70Q9NW82 654 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 VPS29Q9UBQ0 182 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 B4GALT6Q9UBX8 382 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 GLS2Q9UI32 602 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 CXCL10P02778 98 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 RAP2AP10114 183 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 ERP29P30040 261 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 GDI1P31150 447 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 STK11Q15831 433 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SMUG1Q53HV7 270 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 DCUN1D3Q8IWE4 304 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 ZC3H7AQ8IWR0 971 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SETD7Q8WTS6 366 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SACM1LQ9NTJ5 587 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 ELOVL2Q9NXB9 296 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 GDE1Q9NZC3 331 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PNMA8BQ9ULN7 279 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 KCTD3Q9Y597 815 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 WNT6Q9Y6F9 365 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MYH9P35579 1960 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 DHFRP00374 187 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 CAPGP40121 348 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 RAB6CQ53S08 254 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PRAMEF14Q5SWL7 426 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 PRAMEF13Q5VWM6 474 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 FAM20CQ8IXL6 584 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 CLIP4Q8N3C7 705 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 ERMAPQ96PL5 475 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 RAB6CQ9H0N0 254 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 TTYH1Q9H313 450 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 IGSF5Q9NSI5 407 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 ZNF358Q9NW07 568 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 MARCH5Q9NX47 278 aa8.47□□□□□ -1.05
PDE6A-204ENST00000613228 SMPD3Q9NY59 655 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-204ENST00000613228 GSAPA4D1B5 854 aa8.46□□□□□ -1.05
PDE6A-204ENST00000613228 TNFRSF10BO14763 440 aa8.46□□□□□ -1.05
PDE6A-204ENST00000613228 ADAMDEC1O15204 470 aa8.46□□□□□ -1.05
PDE6A-204ENST00000613228 ABLIM3O94929 683 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms