RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ICAM2P13598 275 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 EFNA3P52797 238 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 KCNK10P57789 538 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 SNRPNP63162 240 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 SRSF11Q05519 484 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 CUL1Q13616 776 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 THOC5Q13769 683 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 DHX34Q14147 1143 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 FAM53BQ14153 422 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 NDUFA9Q16795 377 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 TTLL9Q3SXZ7 439 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 THEMIS2Q5TEJ8 643 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 ANKRD22Q5VYY1 191 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 ZNF549Q6P9A3 640 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 TMEM205Q6UW68 189 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 TICAM1Q8IUC6 712 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 DENND6AQ8IWF6 608 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 ZC3H7AQ8IWR0 971 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 LRRC56Q8IYG6 542 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 FBXO15Q8NCQ5 510 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 GIMAP7Q8NHV1 300 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 RELTQ969Z4 430 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 PRAP1Q96NZ9 151 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 FBXO6Q9NRD1 293 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 STMN3Q9NZ72 180 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 SAMD15Q9P1V8 674 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 MED16Q9Y2X0 877 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
POLR2J3-219ENST00000608621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 FAM237BA0A1B0GVD1 139 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 SDR42E2A6NKP2 422 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 STATHP02808 62 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 MAGEA6P43360 314 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 AVPR1BP47901 424 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 ARMC3Q5W041 872 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 ZNF470Q6ECI4 717 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 GFRALQ6UXV0 394 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 OR9A4Q8NGU2 314 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 NR4A3Q92570 626 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 ZNF669Q96BR6 464 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 IMMP1LQ96LU5 166 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 CYTH2Q99418 400 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 EBNA1BP2Q99848 306 aaKnown RBP12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 CCDC68Q9H2F9 335 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 TMEM184CQ9NVA4 438 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 KLHL42Q9P2K6 505 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 ENTPD4Q9Y227 616 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 LRBAP50851 2863 aa12.68□□□□□ -0.38
POLR2J3-219ENST00000608621 ZCWPW2A0A1B0GU75 182 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 ARHGAP10A1A4S6 786 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 GOLGA8MH3BSY2 632 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 HNRNPRO43390 633 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 HAUS5O94927 633 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 RASAL1O95294 804 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 C8orf89P0DMQ9 161 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 MLNP12872 115 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 IMPA1P29218 277 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 SKIV2L2P42285 1042 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 AP2B1P63010 937 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 INAQ16352 499 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 ABHD17BQ5VST6 288 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 HIBCHQ6NVY1 386 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 ZNF662Q6ZS27 426 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 UBE2R2Q712K3 238 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 SHISA5Q8N114 240 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 SUN3Q8TAQ9 357 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 METTL21AQ8WXB1 218 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 KCNJ9Q92806 393 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 GPR21Q99679 349 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 MACROD1Q9BQ69 325 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 TUBB6Q9BUF5 446 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 VN1R1Q9GZP7 353 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 COPG2Q9UBF2 871 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 SCN3AQ9NY46 2000 aa12.67□□□□□ -0.38
POLR2J3-219ENST00000608621 SCN2AQ99250 2005 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 IGHV3-20A0A0C4DH32 117 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 OR5H15A6NDH6 313 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 OR2W5A6NFC9 320 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 A8MUI8 341 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 PRSS44E7EML9 344 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 H0YIG0 161 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 KIF5CO60282 957 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 UNC5CO95185 931 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 CCDC175P0C221 793 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 ENO3P13929 434 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 MST1P26927 711 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 TNFRSF8P28908 595 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 ZNF33BQ06732 778 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 MFSD4BQ5TF39 518 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 TTC27Q6P3X3 843 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 TMEM207Q6UWW9 146 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 PRSS41Q7RTY9 318 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 PIWIL4Q7Z3Z4 852 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms