RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 PRSS21Q9Y6M0 314 aa5.97□□□□□ -1.45
CUX1-220ENST00000607092 MAU2Q9Y6X3 613 aa5.97□□□□□ -1.45
CUX1-220ENST00000607092 CSMD2Q7Z408 3487 aa5.97□□□□□ -1.45
CUX1-220ENST00000607092 PCSK5Q92824 1860 aa5.96□□□□□ -1.45
CUX1-220ENST00000607092 ASPDHA6ND91 283 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 USP27XA6NNY8 438 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 A8MUI8 341 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 BTNL10A8MVZ5 291 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 H0YGG7 62 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 CD3EAPO15446 510 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 KIF5CO60282 957 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 OR1I1O60431 355 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 KRT38O76015 456 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 NSA2O95478 260 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 ESR1P03372 595 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 SNRPB2P08579 225 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 ZNF24P17028 368 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 GRK3P35626 688 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PEX19P40855 299 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 MARCKSL1P49006 195 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 MMP16P51512 607 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 ADARP55265 1226 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 FOXL2P58012 376 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 ARF3P61204 181 aaPredicted RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 TLE4Q04727 773 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 EEF1A2Q05639 463 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 PRDX1Q06830 199 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 OLIG2Q13516 323 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 GRB7Q14451 532 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PCOLCEQ15113 449 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 BTBD16Q32M84 506 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PCID2Q5JVF3 399 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 ACER2Q5QJU3 275 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 FAM182AQ5T1J6 154 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 FRMPD2BQ6IN97 320 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 H3F3CQ6NXT2 135 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PAOXQ6QHF9 649 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 CPEB2Q7Z5Q1 589 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 TAX1BP1Q86VP1 789 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 METTL27Q8N6F8 245 aaPredicted RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 MYRIPQ8NFW9 859 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 OR52K1Q8NGK4 314 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 OR13J1Q8NGT2 312 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 OR9A1PQ8NGU1 263 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 C10orf90Q96M02 699 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 IL17FQ96PD4 163 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 LPAR4Q99677 370 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 OLFM1Q99784 485 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PLCD4Q9BRC7 762 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 TSGA10Q9BZW7 698 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 IL22Q9GZX6 179 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PCBD2Q9H0N5 130 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 CLK4Q9HAZ1 481 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 KCNK13Q9HB14 408 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 KLHL42Q9P2K6 505 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 SH3BGRL2Q9UJC5 107 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 RUVBL1Q9Y265 456 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 DRG1Q9Y295 367 aaKnown RBP5.96□□□□□ -1.46
CUX1-220ENST00000607092 TCAF1Q9Y4C2 921 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 PCDHA13Q9Y5I0 950 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 ATRQ13535 2644 aa5.96□□□□□ -1.46
CUX1-220ENST00000607092 KCNE1BA0A087WTH5 132 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 LOC105369274A0A096LPK9 316 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 LOC102723532A0A0G2JNH3 316 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 A0A0U1RQJ8 604 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 SOWAHDA6NJG2 315 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 COL6A5A8TX70 2615 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 FAM227AF5H4B4 570 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 ASNA1O43681 348 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 FAM155BO75949 473 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 MATN4O95460 622 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 METTL18O95568 372 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 PRSS56P0CW18 603 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 ITGAMP11215 1152 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 ERGP11308 486 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 ENO3P13929 434 aaPredicted RBP5.95□□□□□ -1.46
CUX1-220ENST00000607092 PAMP19021 973 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 JAK1P23458 1154 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 CCND1P24385 295 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 MST1P26927 711 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 CHRNB4P30926 498 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 NPY2RP49146 381 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 RPS15AP62244 130 aaKnown RBP5.95□□□□□ -1.46
CUX1-220ENST00000607092 ADORA2A-AS1P86434 159 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 MPP1Q00013 466 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 CDK16Q00536 496 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 OC90Q02509 493 aaPredicted RBP5.95□□□□□ -1.46
CUX1-220ENST00000607092 TESK1Q15569 626 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 OR1C1Q15619 314 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 C3AR1Q16581 482 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 MINDY4Q4G0A6 757 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 THEMIS2Q5TEJ8 643 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 MFSD4BQ5TF39 518 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 CES4AQ5XG92 561 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 ICE2Q659A1 982 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 SLC25A25Q6KCM7 469 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 LRRC8EQ6NSJ5 796 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 LRRC8BQ6P9F7 803 aa5.95□□□□□ -1.46
CUX1-220ENST00000607092 MEX3BQ6ZN04 569 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms