RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ACSBG2Q5FVE4 666 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 LRRC8EQ6NSJ5 796 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 GFRALQ6UXV0 394 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 RPTNQ6XPR3 784 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 ZNF662Q6ZS27 426 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 PCGF5Q86SE9 256 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 FJX1Q86VR8 437 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 REXO1L1PQ8IX06 675 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 ARHGEF39Q8N4T4 335 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 AMER3Q8N944 861 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 IMMP1LQ96LU5 166 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 PKP4Q99569 1192 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 SYBUQ9NX95 663 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 TAC3Q9UHF0 121 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 MKL2Q9ULH7 1088 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 IGKV1-8A0A0C4DH67 115 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 A0A0U1RQJ8 604 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 FAM237BA0A1B0GVD1 139 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 OR5H15A6NDH6 313 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 SDR42E2A6NKP2 422 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 SMAPO00193 183 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 FOXS1O43638 330 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 KIF5CO60282 957 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 PRAMEF2O60811 474 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 NSA2O95478 260 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 SLC16A8O95907 504 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 CLCN7P51798 805 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 RPS15AP62244 130 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 THOC5Q13769 683 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 PTK6Q13882 451 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 PCOLCEQ15113 449 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 HKDC1Q2TB90 917 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 DTWD1Q8N5C7 304 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 SIRT6Q8N6T7 355 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 CALML6Q8TD86 181 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 ZNF480Q8WV37 535 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 ZNF354BQ96LW1 612 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 TAAR6Q96RI8 345 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 PLA2G3Q9NZ20 509 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 FBN2P35556 2912 aa16.89■□□□□ 0.29
SHKBP1-227ENST00000602011 CTAGE9A4FU28 777 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 PRSS44E7EML9 344 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 WDPCPO95876 746 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 FGGP02679 453 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 PTGER4P35408 488 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 AGTR2P50052 363 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 YBX1P67809 324 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 EEF1A2Q05639 463 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 TSTA3Q13630 321 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 THEMIS2Q5TEJ8 643 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 PLAG1Q6DJT9 500 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 CASC4Q6P4E1 433 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 CES3Q6UWW8 571 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 CENPUQ71F23 418 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 ADCK2Q7Z695 626 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 ZNF808Q8N4W9 903 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 CYTH2Q99418 400 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 XAB2Q9HCS7 855 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 STOX2Q9P2F5 926 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 SEC14L3Q9UDX4 400 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 PCYOX1Q9UHG3 505 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 DHRS7Q9Y394 339 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 POLQO75417 2590 aa16.88■□□□□ 0.29
SHKBP1-227ENST00000602011 A0A0A6YYC8 382 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 GOLGA8KD6RF30 607 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 GOLGA8TH3BQL2 631 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 I3L1I5 382 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 NRP2O60462 931 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 AGAP20933 346 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 DHX34Q14147 1143 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 EXT1Q16394 746 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 KRTCAP3Q53RY4 240 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 UGT3A1Q6NUS8 523 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 HIBCHQ6NVY1 386 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 H3F3CQ6NXT2 135 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 XKRXQ6PP77 449 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 CPEB2Q7Z5Q1 589 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 ZC3H7AQ8IWR0 971 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 CAMKVQ8NCB2 501 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 MCUQ8NE86 351 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 TRIM58Q8NG06 486 aa16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 GABPB2Q8TAK5 448 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-227ENST00000602011 TRGV8A0A0C4DH27 118 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 KRT87PA6NCN2 255 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 H7BY64 318 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 ITGAMP11215 1152 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 CCND1P24385 295 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 GRNP28799 593 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 CA7P43166 264 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 KCNK10P57789 538 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 SRSF11Q05519 484 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 KCNJ11Q14654 390 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 FAAH2Q6GMR7 532 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 NIPAL1Q6NVV3 410 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 CYHR1Q6ZMK1 362 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 MCEMP1Q8IX19 187 aa16.86■□□□□ 0.29
SHKBP1-227ENST00000602011 LRRC56Q8IYG6 542 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms