RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ST13P50502 369 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 ABATP80404 500 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 NDUFA9Q16795 377 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 MINDY4Q4G0A6 757 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 C1QL3Q5VWW1 255 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 ZC3H7AQ8IWR0 971 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 ZCCHC10Q8TBK6 192 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 METTL21AQ8WXB1 218 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 ASB11Q8WXH4 323 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 PSMF1Q92530 271 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 EBNA1BP2Q99848 306 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 IARS2Q9NSE4 1012 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 RIC8BQ9NVN3 520 aa16.68■□□□□ 0.26
SHKBP1-223ENST00000600552 MYO7BQ6PIF6 2116 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 ARHGAP10A1A4S6 786 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 OR2W5A6NFC9 320 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 TXNDC9O14530 226 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 SEC24DO94855 1032 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 HAUS5O94927 633 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 BMP10O95393 424 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 WDPCPO95876 746 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 MPC1LP0DKB6 136 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 EMP3P54852 163 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 SNRPNP63162 240 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 ZNF33BQ06732 778 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 LONRF1Q17RB8 773 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 HSP90AA5PQ58FG0 334 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 GARNL3Q5VVW2 1013 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 NEK10Q6ZWH5 1172 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 SHISA5Q8N114 240 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 MVB12AQ96EY5 273 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 SERPINB12Q96P63 405 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 NDNQ99608 321 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 XAB2Q9HCS7 855 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 HCN3Q9P1Z3 774 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 FBXO5Q9UKT4 447 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 DHRS7Q9Y394 339 aa16.67■□□□□ 0.26
SHKBP1-223ENST00000600552 ITPR2Q14571 2701 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 TRAV17A0A0B4J275 112 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 ZCWPW2A0A1B0GU75 182 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 FEZF1A0PJY2 475 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 C8orf89P0DMQ9 161 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 ENO3P13929 434 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 IL1RNP18510 177 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 IMPA1P29218 277 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 SOX11P35716 441 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 COILP38432 576 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 MAGEA6P43360 314 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 TNFSF10P50591 281 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 PCOLCEQ15113 449 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 ABHD17BQ5VST6 288 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 FCRLBQ6BAA4 426 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 CCDC137Q6PK04 289 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 GFRALQ6UXV0 394 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 CYHR1Q6ZMK1 362 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 MBOAT1Q6ZNC8 495 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 PRSS41Q7RTY9 318 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 SRRM1Q8IYB3 904 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 CD200R1Q8TD46 325 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 TAAR6Q96RI8 345 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 SCN2AQ99250 2005 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 ATG10Q9H0Y0 220 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 CCDC177Q9NQR7 707 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 STMN3Q9NZ72 180 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 TRMT6Q9UJA5 497 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 SH3BGRL2Q9UJC5 107 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 PPP2R2CQ9Y2T4 447 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 MED16Q9Y2X0 877 aa16.66■□□□□ 0.26
SHKBP1-223ENST00000600552 GFYI3L273 518 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 SGK494L7N484 410 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 MLNP12872 115 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 FDXRP22570 491 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 TBPL1P62380 186 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 HIBCHQ6NVY1 386 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 ZNF662Q6ZS27 426 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 LANCL3Q6ZV70 420 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 PALM2Q8IXS6 379 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 MCUQ8NE86 351 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 SUN3Q8TAQ9 357 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 CALML6Q8TD86 181 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 MCOLN3Q8TDD5 553 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 EEF1AKMT1Q8WVE0 214 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 KCNJ9Q92806 393 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 HAS2Q92819 552 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 AARSD1Q9BTE6 412 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 TGIF2Q9GZN2 237 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 ZNF700Q9H0M5 742 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 TMEM184CQ9NVA4 438 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 ADAMTS6Q9UKP5 1117 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 SH2B3Q9UQQ2 575 aa16.65■□□□□ 0.26
SHKBP1-223ENST00000600552 CRYBG3Q68DQ2 2970 aa16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 TRGV8A0A0C4DH27 118 aa16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 XCR1P46094 333 aa16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 EFNA3P52797 238 aa16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 NAE1Q13564 534 aa16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 FAM53BQ14153 422 aa16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 ZRSR2Q15696 482 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-223ENST00000600552 BTBD16Q32M84 506 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms