RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 ONECUT2O95948 504 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 STATHP02808 62 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 C2P06681 752 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 CD63P08962 238 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 LTA4HP09960 611 aaKnown RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 FAM153BP0C7A2 387 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 FAM87AP0C7U9 286 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 PIM1P11309 404 aaPredicted RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 TFEBP19484 476 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 GRK3P35626 688 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 CCR10P46092 362 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 OR1D4P47884 311 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 SERPINB8P50452 374 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 CSRP3P50461 194 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 CCR8P51685 355 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 PMS2P54278 862 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 EMP3P54852 163 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 FAM153CQ494X1 144 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 MRPL14Q6P1L8 145 aaKnown RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 COX15Q7KZN9 410 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 VN1R4Q7Z5H5 301 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 CCDC91Q7Z6B0 441 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 EXD3Q8N9H8 876 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 ABHD11Q8NFV4 315 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 SLC5A11Q8WWX8 675 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 EXT2Q93063 718 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 NEIL2Q969S2 332 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 NXNL1Q96CM4 212 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 THAP11Q96EK4 314 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 TSNARE1Q96NA8 513 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 ALG9Q9H6U8 611 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 NMRAL1Q9HBL8 299 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 IGSF5Q9NSI5 407 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 WWOXQ9NZC7 414 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 RNF112Q9ULX5 631 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 SLC22A14Q9Y267 594 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 PTRH2Q9Y3E5 179 aaKnown RBP13.21□□□□□ -0.29
UPF1-205ENST00000598209 DYRK1BQ9Y463 629 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 MAU2Q9Y6X3 613 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 KCNE1BA0A087WTH5 132 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 A0A096LPK6 155 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 EIF4E1BA6NMX2 242 aaKnown RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 LCMT2O60294 686 aaKnown RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 WDR47O94967 919 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 ALDOAP04075 364 aaKnown RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 ABHD2P08910 425 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 TYK2P29597 1187 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 SLC26A3P40879 764 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 BCL6P41182 706 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 FOLR3P41439 243 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 GDF5P43026 501 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 MSH2P43246 934 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 SLC6A12P48065 614 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 SERPINB9P50453 376 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 POLE2P56282 527 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 IRF9Q00978 393 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 MEF2AQ02078 507 aaPredicted RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 CDKL4Q5MAI5 379 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 CATSPEREQ5SY80 951 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 GARNL3Q5VVW2 1013 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 SULT1C3Q6IMI6 304 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 PRMT9Q6P2P2 845 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 OVCH1Q7RTY7 1134 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 ISCA2Q86U28 154 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 KLHDC8AQ8IYD2 350 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 CENPLQ8N0S6 344 aaPredicted RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 OR4K1Q8NGD4 311 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 STAG3L4Q8TBR4 150 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 ADAMTS17Q8TE56 1095 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 KCTD4Q8WVF5 259 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 APOBEC4Q8WW27 367 aaKnown RBP13.2□□□□□ -0.3
UPF1-205ENST00000598209 THAP4Q8WY91 577 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 TMEM79Q9BSE2 394 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 ZNF304Q9HCX3 659 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 CD274Q9NZQ7 290 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 TLK1Q9UKI8 766 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 KCNMB2Q9Y691 235 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
UPF1-205ENST00000598209 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 EXOC1LA0A1B0GW35 172 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 TRBC2A0A5B9 178 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 TAPBPO15533 448 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 RIPK2O43353 540 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 KERAO60938 352 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 KRT38O76015 456 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 ALBP02768 609 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
UPF1-205ENST00000598209 PRB1P04280 392 aa13.19□□□□□ -0.3
UPF1-205ENST00000598209 KCNC1P48547 511 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms