RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 BMPR2Q13873 1038 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 CSHL1Q14406 222 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 OR4D1Q15615 310 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 UAP1Q16222 522 aaPredicted RBP15.95■□□□□ 0.14
SSBP4-204ENST00000597724 THOC6Q86W42 341 aaKnown RBP15.95■□□□□ 0.14
SSBP4-204ENST00000597724 GPSM1Q86YR5 675 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 OR4K1Q8NGD4 311 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.95■□□□□ 0.14
SSBP4-204ENST00000597724 SLC44A1Q8WWI5 657 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 THAP4Q8WY91 577 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 KIAA1191Q96A73 305 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 FKBP10Q96AY3 582 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 PTERQ96BW5 349 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 RHBDF1Q96CC6 855 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 THAP11Q96EK4 314 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 CABS1Q96KC9 395 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
SSBP4-204ENST00000597724 MAN2B2Q9Y2E5 1009 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 PADI2Q9Y2J8 665 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 FEZF1A0PJY2 475 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 SFTPCP11686 197 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 CCR8P51685 355 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 DLG1Q12959 904 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 CDKL4Q5MAI5 379 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 GARNL3Q5VVW2 1013 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 PRMT9Q6P2P2 845 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 COX15Q7KZN9 410 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 VN1R4Q7Z5H5 301 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 TBC1D1Q86TI0 1168 aaPredicted RBP15.94■□□□□ 0.14
SSBP4-204ENST00000597724 KLHDC8AQ8IYD2 350 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 METTL27Q8N6F8 245 aaPredicted RBP15.94■□□□□ 0.14
SSBP4-204ENST00000597724 OR2Y1Q8NGV0 311 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 NEIL2Q969S2 332 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 TM4SF19Q96DZ7 209 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 SARGQ9BW04 601 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 SLC26A1Q9H2B4 701 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 ADNPQ9H2P0 1102 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 WDR54Q9H977 334 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 ZNF304Q9HCX3 659 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 SLC22A14Q9Y267 594 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 ACOT9Q9Y305 439 aa15.94■□□□□ 0.14
SSBP4-204ENST00000597724 PTRH2Q9Y3E5 179 aaKnown RBP15.94■□□□□ 0.14
SSBP4-204ENST00000597724 TAPBPO15533 448 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 C1QL1O75973 258 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 C2P06681 752 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 GRK3P35626 688 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 GGT5P36269 586 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 BCL6P41182 706 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 FOLR3P41439 243 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 GDF5P43026 501 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 SLC6A12P48065 614 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 KCNC1P48547 511 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 KCNAB2Q13303 367 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 SSPNQ14714 243 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 NKG7Q16617 165 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 C18orf21Q32NC0 220 aaPredicted RBP15.93■□□□□ 0.14
SSBP4-204ENST00000597724 CATSPEREQ5SY80 951 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 CCDC91Q7Z6B0 441 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 ISCA2Q86U28 154 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 APLFQ8IW19 511 aaPredicted RBP15.93■□□□□ 0.14
SSBP4-204ENST00000597724 TMEM151BQ8IW70 566 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 SLC5A11Q8WWX8 675 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 MVB12AQ96EY5 273 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 PAFAH2Q99487 392 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 NMRAL1Q9HBL8 299 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 SNX15Q9NRS6 342 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 IGSF5Q9NSI5 407 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 TUBD1Q9UJT1 453 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 RNF112Q9ULX5 631 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 CDC14AQ9UNH5 594 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 DYRK1BQ9Y463 629 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 KCNE2Q9Y6J6 123 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 MAU2Q9Y6X3 613 aa15.93■□□□□ 0.14
SSBP4-204ENST00000597724 COL6A6A6NMZ7 2263 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 A0A087WUV0 522 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 A0A087X1B8 175 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 NCF1BA6NI72 391 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 NCF1CA8MVU1 366 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 FOXS1O43638 330 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 ALDOAP04075 364 aaKnown RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 UMODP07911 640 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 INHBAP08476 426 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 LTA4HP09960 611 aaKnown RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 FAM153BP0C7A2 387 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 NCF1P14598 390 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 TFEBP19484 476 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 TYK2P29597 1187 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 PMS2P54278 862 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 FOXL2P58012 376 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 MEF2AQ02078 507 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 FAM53BQ14153 422 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 FAM153CQ494X1 144 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 SULT1C3Q6IMI6 304 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 NXPE4Q6UWF7 544 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 TRMT10CQ7L0Y3 403 aaKnown RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 CENPLQ8N0S6 344 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-204ENST00000597724 TCAIMQ8N3R3 496 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 MFSD9Q8NBP5 474 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 PDPRQ8NCN5 879 aa15.92■□□□□ 0.14
SSBP4-204ENST00000597724 ZNF740Q8NDX6 193 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms