RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	ZSWIM9	Q86XI8	627 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	SPERT	Q8NA61	448 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	SMIM14	Q96QK8	99 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	INPP5K	Q9BT40	448 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	FARSB	Q9NSD9	589 aa	Known RBP	14	□□□□□ -0.17
RFX2-222	ENST00000592546	MUTYH	Q9UIF7	546 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	OR1I1	O60431	355 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	STS	P08842	583 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	IL7	P13232	177 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	CD9	P21926	228 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	GNPDA1	P46926	289 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	PIK3CG	P48736	1102 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	OLR1	P78380	273 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	GPAT3	Q53EU6	434 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	INO80D	Q53TQ3	878 aa	Predicted RBP	14	□□□□□ -0.17
RFX2-222	ENST00000592546	TOR1AIP1	Q5JTV8	583 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	TRAF7	Q6Q0C0	670 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	CARNMT1	Q8N4J0	409 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	OR4K2	Q8NGD2	314 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	MCCC1	Q96RQ3	725 aa	Predicted RBP	14	□□□□□ -0.17
RFX2-222	ENST00000592546	SEPT5	Q99719	369 aa	Predicted RBP	14	□□□□□ -0.17
RFX2-222	ENST00000592546	POLR1E	Q9GZS1	481 aa	Known RBP	14	□□□□□ -0.17
RFX2-222	ENST00000592546	REEP1	Q9H902	201 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	ASAH2	Q9NR71	780 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	CREBZF	Q9NS37	354 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	ASIC5	Q9NY37	505 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546	GPR83	Q9NYM4	423 aa		14	□□□□□ -0.17
RFX2-222	ENST00000592546		A0A0X1KG70	313 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	FFAR3	O14843	346 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	GPR42	O15529	346 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	EOMES	O95936	686 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	GGT2	P36268	569 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	PBX3	P40426	434 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	HTR2B	P41595	481 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	PRIM2	P49643	509 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	ITGA1	P56199	1179 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	TTLL9	Q3SXZ7	439 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	C19orf48	Q6RUI8	117 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	GALNT10	Q86SR1	603 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	PIANP	Q8IYJ0	282 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	FAM193B	Q96PV7	902 aa	Predicted RBP	13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	DHRS9	Q9BPW9	319 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	GON7	Q9BXV9	100 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	C3orf14	Q9HBI5	128 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	AASDHPPT	Q9NRN7	309 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	SRRD	Q9UH36	339 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	SATB2	Q9UPW6	733 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	SLC28A1	O00337	649 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	TFEC	O14948	347 aa	Predicted RBP	13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	VNN2	O95498	520 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	C9	P02748	559 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	CDKN2C	P42773	168 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	GATM	P50440	423 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	NUDT6	P53370	316 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	BAK1	Q16611	211 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	USP39	Q53GS9	565 aa	Known RBP	13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	ANKRD46	Q86W74	232 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	IQCF2	Q8IXL9	164 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	PGBD3	Q8N328	593 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	RAET1E	Q8TD07	263 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	KCNC2	Q96PR1	638 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	LRTM1	Q9HBL6	345 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	SMURF1	Q9HCE7	757 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	DYRK4	Q9NR20	520 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	OLA1	Q9NTK5	396 aa	Known RBP	13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	STMN3	Q9NZ72	180 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	NUFIP1	Q9UHK0	495 aa	Known RBP	13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	PRELID1	Q9Y255	219 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546		V9GYH0	126 aa		13.99	□□□□□ -0.17
RFX2-222	ENST00000592546	VWA8	A3KMH1	1905 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	TMEM189-UBE2V1	I3L0A0	370 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	PRAMEF11	O60813	436 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	CYP7B1	O75881	506 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	B3GALT4	O96024	378 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	IGLV3-27	P01718	113 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	HSMCR30	P0CW71	290 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	BCKDHA	P12694	445 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	CD72	P21854	359 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	HOXD10	P28358	340 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	PKLR	P30613	574 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	CYP4F2	P78329	520 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	FAM189B	P81408	668 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	ZNF235	Q14590	738 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	ZMAT1	Q5H9K5	638 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	C10orf62	Q5T681	223 aa	Predicted RBP	13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	PSAPL1	Q6NUJ1	521 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	DOK6	Q6PKX4	331 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	TRIM46	Q7Z4K8	759 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	OR7D4	Q8NG98	312 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	CEP295NL	Q96MC4	621 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	TRIB3	Q96RU7	358 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	ROGDI	Q9GZN7	287 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	TLR8	Q9NR97	1041 aa	Known RBP	13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	RPS6KA6	Q9UK32	745 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	PLK4	O00444	970 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	GFRA2	O00451	464 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	RGR	P47804	291 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	OR3A3	P47888	321 aa		13.98	□□□□□ -0.17
RFX2-222	ENST00000592546	PXN	P49023	591 aa	Predicted RBP	13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms