RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 HIST1H2AJQ99878 128 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 H2AFJQ9BTM1 129 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 PCBD2Q9H0N5 130 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 SLC25A18Q9H1K4 315 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 SLC26A1Q9H2B4 701 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 CTNNAL1Q9UBT7 734 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 TUBD1Q9UJT1 453 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 TLK1Q9UKI8 766 aa17.36■□□□□ 0.37
DDX39A-212ENST00000590260 MED13Q9UHV7 2174 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 KCNE1BA0A087WTH5 132 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 VSTM2BA6NLU5 285 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 FFAR3O14843 346 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 GPR42O15529 346 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 TAPBPO15533 448 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 STMN1P16949 149 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 CCND1P24385 295 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 SPRP35270 261 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-212ENST00000590260 SLC6A12P48065 614 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 RAB10P61026 200 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 C19orf57Q0VDD7 668 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 NFATC3Q12968 1075 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 BMPR2Q13873 1038 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 FAM214AQ32MH5 1076 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 CAPN13Q6MZZ7 669 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-212ENST00000590260 SHISA6Q6ZSJ9 500 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 PRSS41Q7RTY9 318 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 MRGPREQ86SM8 312 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 KLHDC8AQ8IYD2 350 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 AMER3Q8N944 861 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 IFT81Q8WYA0 676 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 NEIL2Q969S2 332 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 RHBDF1Q96CC6 855 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 TMEM79Q9BSE2 394 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 ACSS3Q9H6R3 686 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 TXNDC16Q9P2K2 825 aa17.35■□□□□ 0.37
DDX39A-212ENST00000590260 B8ZZF3 427 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 ALBP02768 609 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 HRH2P25021 359 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 OTX2P32243 289 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 GDF5P43026 501 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 NAB1Q13506 487 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 SSPNQ14714 243 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 TGFBIQ15582 683 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 MUM1Q2TAK8 710 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 FBXO48Q5FWF7 155 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 THOC6Q86W42 341 aaKnown RBP17.34■□□□□ 0.37
DDX39A-212ENST00000590260 CEP112Q8N8E3 955 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 TNRC6AQ8NDV7 1962 aaKnown RBP17.34■□□□□ 0.37
DDX39A-212ENST00000590260 MRRFQ96E11 262 aaKnown RBP17.34■□□□□ 0.37
DDX39A-212ENST00000590260 MOCOSQ96EN8 888 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 TSPAN17Q96FV3 270 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 CABS1Q96KC9 395 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 TSNARE1Q96NA8 513 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 FMO2Q99518 471 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 C17orf62Q9BQA9 187 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 SARGQ9BW04 601 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 TRIM54Q9BYV2 358 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 FAM129AQ9BZQ8 928 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 SOX17Q9H6I2 414 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-212ENST00000590260 WDR54Q9H977 334 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 ZNF304Q9HCX3 659 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 ZNF71Q9NQZ8 489 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-212ENST00000590260 IGSF5Q9NSI5 407 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 GPN3Q9UHW5 284 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-212ENST00000590260 SLC22A14Q9Y267 594 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 TP53TG5Q9Y2B4 290 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 ASB1Q9Y576 335 aa17.34■□□□□ 0.37
DDX39A-212ENST00000590260 IGLV3-12A0A075B6K2 115 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 PRAMEF4O60810 478 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 RFPL1O75677 317 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 CEACAM4O75871 244 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 FOLR3P41439 243 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 SLC12A2P55011 1212 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 RPS15AP62244 130 aaKnown RBP17.33■□□□□ 0.36
DDX39A-212ENST00000590260 IRF9Q00978 393 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 ILF2Q12905 390 aaKnown RBP17.33■□□□□ 0.36
DDX39A-212ENST00000590260 CSHL1Q14406 222 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 SYT16Q17RD7 645 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 PRAMEF9Q5VWM5 478 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 ADAMTSL2Q86TH1 951 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 CENPLQ8N0S6 344 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-212ENST00000590260 KCT2Q8NC54 265 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 C9orf43Q8TAL5 461 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-212ENST00000590260 ATL1Q8WXF7 558 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 ESAMQ96AP7 390 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 HAUS8Q9BT25 410 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 ING2Q9H160 280 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 MLXIPLQ9NP71 852 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 PADI2Q9Y2J8 665 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 COL6A6A6NMZ7 2263 aa17.33■□□□□ 0.36
DDX39A-212ENST00000590260 A0A0A6YYC8 382 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 NCF1BA6NI72 391 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 NCF1CA8MVU1 366 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 I3L1I5 382 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 SOCS6O14544 535 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 ACSL3O95573 720 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 ANXA5P08758 320 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 NCF1P14598 390 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 SLC26A3P40879 764 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 SLMAPQ14BN4 828 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms