RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 DENND6AQ8IWF6 608 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 PRELID2Q8N945 189 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 OR9A4Q8NGU2 314 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 GIMAP7Q8NHV1 300 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF480Q8WV37 535 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 METTL21AQ8WXB1 218 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 PSMF1Q92530 271 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 NR4A3Q92570 626 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 OR2A5Q96R48 311 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 TCF12Q99081 682 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 RBCK1Q9BYM8 510 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 UNKQ9C0B0 810 aaKnown RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 INTS10Q9NVR2 710 aaKnown RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 HCN3Q9P1Z3 774 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 COPG2Q9UBF2 871 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 SUCOQ9UBS9 1254 aaKnown RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 VPS9D1Q9Y2B5 631 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 A8MUI8 341 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 H7BY64 318 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 TXNDC9O14530 226 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
HDAC5-208ENST00000588419 RASAL1O95294 804 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 STSP08842 583 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 IL1RNP18510 177 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 HSD17B2P37059 387 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 SLC1A2P43004 574 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 CLCN7P51798 805 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 TDGF1P3P51864 188 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 SNRPNP63162 240 aaKnown RBP12.99□□□□□ -0.33
HDAC5-208ENST00000588419 INAQ16352 499 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 BTBD16Q32M84 506 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 GARNL3Q5VVW2 1013 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 FCRLBQ6BAA4 426 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF425Q6IV72 752 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 UBE2R2Q712K3 238 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-208ENST00000588419 PRSS41Q7RTY9 318 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 PIWIL4Q7Z3Z4 852 aaKnown RBP12.99□□□□□ -0.33
HDAC5-208ENST00000588419 CPNE9Q8IYJ1 553 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 PRAP1Q96NZ9 151 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 GPR21Q99679 349 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 MACROD1Q9BQ69 325 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 MAD1L1Q9Y6D9 718 aa12.99□□□□□ -0.33
HDAC5-208ENST00000588419 OR5H15A6NDH6 313 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 E7ENX8 843 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 PCDH17O14917 1159 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 ZBTB14O43829 449 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 KIF5CO60282 957 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 KRT14P02533 472 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 SNRPB2P08579 225 aaKnown RBP12.98□□□□□ -0.33
HDAC5-208ENST00000588419 MPC1LP0DKB6 136 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 IMPA1P29218 277 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 EFNA3P52797 238 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 EMP3P54852 163 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 ADARP55265 1226 aaKnown RBP12.98□□□□□ -0.33
HDAC5-208ENST00000588419 TBPL1P62380 186 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 ABATP80404 500 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 MPP1Q00013 466 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 CDK16Q00536 496 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 TAP2Q03519 686 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 SP5Q6BEB4 398 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-208ENST00000588419 RIPOR1Q6ZS17 1223 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 TICAM1Q8IUC6 712 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 SHISA5Q8N114 240 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 HAS2Q92819 552 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 EBNA1BP2Q99848 306 aaKnown RBP12.98□□□□□ -0.33
HDAC5-208ENST00000588419 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-208ENST00000588419 C20orf96Q9NUD7 363 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-208ENST00000588419 SEC14L3Q9UDX4 400 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 ITPR2Q14571 2701 aa12.98□□□□□ -0.33
HDAC5-208ENST00000588419 FEZF1A0PJY2 475 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 OR2W5A6NFC9 320 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 FAM227AF5H4B4 570 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 SGK494L7N484 410 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 CCL21O00585 134 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 PRAMEF2O60811 474 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 CDC123O75794 336 aaPredicted RBP12.97□□□□□ -0.33
HDAC5-208ENST00000588419 CRYABP02511 175 aaKnown RBP12.97□□□□□ -0.33
HDAC5-208ENST00000588419 CCDC175P0C221 793 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 PRF1P14222 555 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 MST1P26927 711 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 GRNP28799 593 aaKnown RBP12.97□□□□□ -0.33
HDAC5-208ENST00000588419 XCR1P46094 333 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 AP2B1P63010 937 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 LONRF1Q17RB8 773 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF549Q6P9A3 640 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 TMEM207Q6UWW9 146 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 MBOAT1Q6ZNC8 495 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
HDAC5-208ENST00000588419 MCOLN3Q8TDD5 553 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 NDNQ99608 321 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 TGIF2Q9GZN2 237 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 KCNK13Q9HB14 408 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 ANKRD10Q9NXR5 420 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 STMN3Q9NZ72 180 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms