RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 TNFSF10P50591 281 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 PMP22Q01453 160 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 THOC5Q13769 683 aaKnown RBP8.47□□□□□ -1.05
GGA3-207ENST00000578896 RNF187Q5TA31 235 aaPredicted RBP8.47□□□□□ -1.05
GGA3-207ENST00000578896 MFSD4BQ5TF39 518 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 FAM180AQ6UWF9 173 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 C4orf22Q6V702 233 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 LANCL3Q6ZV70 420 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 ARHGEF39Q8N4T4 335 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 BCORP1Q8N888 145 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 ZCCHC10Q8TBK6 192 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 ASB11Q8WXH4 323 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 RERGQ96A58 199 aaPredicted RBP8.47□□□□□ -1.05
GGA3-207ENST00000578896 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
GGA3-207ENST00000578896 VPS50Q96JG6 964 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 NDNQ99608 321 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 SLX1AQ9BQ83 275 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 FAM114A2Q9NRY5 505 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 C20orf96Q9NUD7 363 aaPredicted RBP8.47□□□□□ -1.05
GGA3-207ENST00000578896 SAMD15Q9P1V8 674 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 HCN3Q9P1Z3 774 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 SH3BGRL2Q9UJC5 107 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 CDC14AQ9UNH5 594 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 MAD1L1Q9Y6D9 718 aa8.47□□□□□ -1.05
GGA3-207ENST00000578896 DNAJC13O75165 2243 aa8.46□□□□□ -1.05
GGA3-207ENST00000578896 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 DYTNA2CJ06 578 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 SDR42E2A6NKP2 422 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 SGK494L7N484 410 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 AP3B1O00203 1094 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 PFDN6O15212 129 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ZNHIT1O43257 154 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 LCMT2O60294 686 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 DNAJB6O75190 326 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 BANF1O75531 89 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 BMP10O95393 424 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 B3GALT4O96024 378 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 CCDC175P0C221 793 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 MPC1LP0DKB6 136 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 PAMP19021 973 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 MST1P26927 711 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 GRNP28799 593 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 COILP38432 576 aaPredicted RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 TDGF1P3P51864 188 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ADARP55265 1226 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 CDK16Q00536 496 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 TIAL1Q01085 375 aaKnown RBP eCLIP8.46□□□□□ -1.06
GGA3-207ENST00000578896 ARHGAP19Q14CB8 494 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ZRSR2Q15696 482 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 TTLL9Q3SXZ7 439 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 MINDY4Q4G0A6 757 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ZNF324BQ6AW86 544 aaPredicted RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 SP5Q6BEB4 398 aaPredicted RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 HIBCHQ6NVY1 386 aaPredicted RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 NEK10Q6ZWH5 1172 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 UBE2R2Q712K3 238 aaPredicted RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 VN1R4Q7Z5H5 301 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 CD200R1Q8TD46 325 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 SERPINB12Q96P63 405 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 RBCK1Q9BYM8 510 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 VN1R1Q9GZP7 353 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 DRC3Q9H069 523 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ATG10Q9H0Y0 220 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 CCDC68Q9H2F9 335 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 MKKSQ9NPJ1 570 aaPredicted RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 IARS2Q9NSE4 1012 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 INTS10Q9NVR2 710 aaKnown RBP8.46□□□□□ -1.06
GGA3-207ENST00000578896 SLC17A6Q9P2U8 582 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ADAMTS6Q9UKP5 1117 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 ZKSCAN5Q9Y2L8 839 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 DHRS7Q9Y394 339 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 F8P00451 2351 aa8.46□□□□□ -1.06
GGA3-207ENST00000578896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.45□□□□□ -1.06
GGA3-207ENST00000578896 LOC102723996A0A087X1L8 192 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 TRAV17A0A0B4J275 112 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 TRGV8A0A0C4DH27 118 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ZNF860A6NHJ4 632 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 GOLGA6L6A8MZA4 724 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 PRSS44E7EML9 344 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 GFYI3L273 518 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 PCDH17O14917 1159 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ZBTB14O43829 449 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 MAN1A2O60476 641 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 UNC5CO95185 931 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 CCNDBP1O95273 360 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
GGA3-207ENST00000578896 C8orf89P0DMQ9 161 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 BCL6P41182 706 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 MAGEA6P43360 314 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 AVPR1BP47901 424 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 EMP3P54852 163 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 TBPL1P62380 186 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 CSNK1G2P78368 415 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ABATP80404 500 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ZNF33BQ06732 778 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 LONRF1Q17RB8 773 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 HSP90AA5PQ58FG0 334 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 GARNL3Q5VVW2 1013 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms