RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 KLHDC8AQ8IYD2 350 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 OR4E2Q8NGC2 313 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 CXorf40BQ96DE9 158 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 GUCD1Q96NT3 240 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 THUMPD3Q9BV44 507 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 ALG2Q9H553 416 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 CLMPQ9H6B4 373 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 BRF2Q9HAW0 419 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 LTB4R2Q9NPC1 389 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 NMRK1Q9NWW6 199 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 RUVBL1Q9Y265 456 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 COLEC10Q9Y6Z7 277 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 FANCMQ8IYD8 2048 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 ARHGAP10A1A4S6 786 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 ACOT8O14734 319 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 NVLO15381 856 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 OR1F1O43749 312 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 DFNA5O60443 496 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 KCNJ13O60928 360 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 NDUFS2O75306 463 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 APBB3O95704 486 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 MTHFD1P11586 935 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 HSD3B1P14060 373 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 EFNA1P20827 205 aaPredicted RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 PRPH2P23942 346 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 HSD3B2P26439 372 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 GRIA3P42263 894 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 CLNS1AP54105 237 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 PRKCQQ04759 706 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 LIPEQ05469 1076 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 LAPTM5Q13571 262 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 ALG11Q2TAA5 492 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 KIAA0895LQ68EN5 471 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 OR4F3Q6IEY1 312 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 C8orf82Q6P1X6 216 aaPredicted RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 FAM9CQ8IZT9 166 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 TMEM145Q8NBT3 493 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 OR7A2PQ8NGA2 310 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 CGREF1Q99674 301 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 KCTD14Q9BQ13 255 aaPredicted RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 ECSITQ9BQ95 431 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 AIF1LQ9BQI0 150 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 EHD1Q9H4M9 534 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 SPATA7Q9P0W8 599 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 CD300AQ9UGN4 299 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 ISM1B1AKI9 464 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 PCDH7O60245 1069 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 STATHP02808 62 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 RPSAP08865 295 aaKnown RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 THEGLP0DJG4 465 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 NCK1P16333 377 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 MAOBP27338 520 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 KIR3DL1P43629 444 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 RGS19P49795 217 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 CCR8P51685 355 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 YPEL5P62699 121 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 ZNF33BQ06732 778 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 FOXM1Q08050 763 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 ILF3Q12906 894 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMG1-215ENST00000568239 PWP1Q13610 501 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SPIN4Q56A73 249 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 ICE2Q659A1 982 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 DLEU7Q6UYE1 221 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SPPL2CQ8IUH8 684 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 TRIM48Q8IWZ4 208 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMG1-215ENST00000568239 NRG4Q8WWG1 115 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 LCN9Q8WX39 176 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 GTF2H4Q92759 462 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 UBE2E3Q969T4 207 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 TMEM125Q96AQ2 219 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 SHDQ96IW2 340 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 TBCDQ9BTW9 1192 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 MENTQ9BUN1 341 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SORBS1Q9BX66 1292 aaKnown RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 PCBD2Q9H0N5 130 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 TCEAL2Q9H3H9 227 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 MVB12BQ9H7P6 319 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 COPS7BQ9H9Q2 264 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 DMRT3Q9NQL9 472 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 TMEM45AQ9NWC5 275 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 ASIC5Q9NY37 505 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 WSB2Q9NYS7 404 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 VAPAQ9P0L0 249 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SH3BP4Q9P0V3 963 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 ABCD2Q9UBJ2 740 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 PPT2Q9UMR5 302 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 USP22Q9UPT9 525 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 AURKCQ9UQB9 309 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 PCDHA9Q9Y5H5 950 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SPAG17Q6Q759 2223 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 LAMA1P25391 3075 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 A0A1W2PPV9 198 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 RFXANKO14593 260 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 CPSF4O95639 269 aaKnown RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 TNFP01375 233 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms