RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 FBXO6Q9NRD1 293 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 UTP6Q9NYH9 597 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MKL2Q9ULH7 1088 aa15.83■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 VPS9D1Q9Y2B5 631 aa15.83■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 DCHS2Q6V1P9 2916 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ZCWPW2A0A1B0GU75 182 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 A0A1B0GUH1 482 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 FAM237BA0A1B0GVD1 139 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GFYI3L273 518 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CEP104O60308 925 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 WDPCPO95876 746 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SYF2O95926 243 aaKnown RBP15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 STATHP02808 62 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PRF1P14222 555 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SKIV2L2P42285 1042 aaKnown RBP15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ABATP80404 500 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SRSF11Q05519 484 aaKnown RBP15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GPS1Q13098 491 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 FAM53BQ14153 422 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TTLL9Q3SXZ7 439 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 HIBCHQ6NVY1 386 aaPredicted RBP15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TTC27Q6P3X3 843 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CYHR1Q6ZMK1 362 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ZNF662Q6ZS27 426 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PRSS41Q7RTY9 318 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SLC34A3Q8N130 599 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 KCNJ9Q92806 393 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 RELTQ969Z4 430 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 IMMP1LQ96LU5 166 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 KLHL42Q9P2K6 505 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ABCA12Q86UK0 2595 aa15.82■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CTAGE9A4FU28 777 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 H7BY64 318 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TXNDC9O14530 226 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 WFS1O76024 890 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MPC1LP0DKB6 136 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 C8orf89P0DMQ9 161 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TNFRSF8P28908 595 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 IMPA1P29218 277 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SLC1A2P43004 574 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SARNPP82979 210 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PIWIL4Q7Z3Z4 852 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 VN1R4Q7Z5H5 301 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 AGGF1Q8N302 714 aaeCLIP15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 OR9A4Q8NGU2 314 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CD200R1Q8TD46 325 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MARVELD3Q96A59 401 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PRAP1Q96NZ9 151 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GPR21Q99679 349 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 VN1R1Q9GZP7 353 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 RNF32Q9H0A6 362 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 HOMER3Q9NSC5 361 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SAMD15Q9P1V8 674 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ENTPD4Q9Y227 616 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 DHRS7Q9Y394 339 aa15.81■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ZGRF1Q86YA3 2104 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 IGHV3-20A0A0C4DH32 117 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ARHGAP10A1A4S6 786 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 KIF5CO60282 957 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 KRT14P02533 472 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 UQCRHP07919 91 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MST1P26927 711 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 THEMIS2Q5TEJ8 643 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 LANCL3Q6ZV70 420 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CPNE9Q8IYJ1 553 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SERPINB12Q96P63 405 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 EBNA1BP2Q99848 306 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MACROD1Q9BQ69 325 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TUBB6Q9BUF5 446 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CNTRLQ7Z7A1 2325 aa15.8■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MAGEB16A2A368 324 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 OR5H15A6NDH6 313 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 OR2W5A6NFC9 320 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SDR42E2A6NKP2 422 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 H0YIG0 161 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GOLGA8MH3BSY2 632 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 HNRNPRO43390 633 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ZBTB14O43829 449 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SEC24DO94855 1032 aaPredicted RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 NSA2O95478 260 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CCDC175P0C221 793 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MLNP12872 115 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ICAM2P13598 275 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ENO3P13929 434 aaPredicted RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 AVPR1BP47901 424 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TBPL1P62380 186 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MPP1Q00013 466 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 THOC5Q13769 683 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 NDUFA9Q16795 377 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SP5Q6BEB4 398 aaPredicted RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GFRALQ6UXV0 394 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 UBE2R2Q712K3 238 aaPredicted RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SRRM1Q8IYB3 904 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TRIM58Q8NG06 486 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CCDC68Q9H2F9 335 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ABI3Q9P2A4 366 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 COPG2Q9UBF2 871 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SH2B3Q9UQQ2 575 aa15.79■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 DIDO1Q9BTC0 2240 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms