RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 GPR156Q8NFN8 814 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 HUS1BQ8NHY5 278 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 FLVCR1-AS1Q8TAF5 88 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 MTERF1Q99551 399 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 TBC1D10AQ9BXI6 508 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 PITHD1Q9GZP4 211 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 UCK1Q9HA47 277 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 CAPN10Q9HC96 672 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 SLC6A20Q9NP91 592 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 HRASLS2Q9NWW9 162 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ACTR10Q9NZ32 417 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ENTPD2Q9Y5L3 495 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 TNRC6BQ9UPQ9 1833 aaKnown RBP10.78□□□□□ -0.68
USP3-218ENST00000560202 GSAPA4D1B5 854 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 MAGEB17A8MXT2 336 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 C2orf74A8MZ97 194 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 PATE3B3GLJ2 98 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 NPIPB8E9PQR5 432 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 SLC22A2O15244 555 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 DFNA5O60443 496 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 RSL1D1O76021 490 aaKnown RBP10.78□□□□□ -0.68
USP3-218ENST00000560202 CBX6O95503 412 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 GIMD1P0DJR0 217 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 HSD3B1P14060 373 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 UGT2B7P16662 529 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 PRPH2P23942 346 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 HRH2P25021 359 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 HSD3B2P26439 372 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 ADSLP30566 484 aaPredicted RBP10.78□□□□□ -0.68
USP3-218ENST00000560202 ATP4BP51164 291 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 NUBP1P53384 320 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 REEP5Q00765 189 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 EMX2Q04743 252 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 KLF10Q13118 480 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 SQLEQ14534 574 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 SMU1Q2TAY7 513 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 RFTN2Q52LD8 501 aaPredicted RBP10.78□□□□□ -0.68
USP3-218ENST00000560202 TRIM61Q5EBN2 209 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 KIAA1614Q5VZ46 1190 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 SLC23A3Q6PIS1 610 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 OOSP2Q86WS3 158 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 KYQ8NBH2 561 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 ITFG2Q969R8 447 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 DTNBP1Q96EV8 351 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 OR2A14Q96R47 310 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 DPH7Q9BTV6 452 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 TUBB6Q9BUF5 446 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 NT5DC2Q9H857 520 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 BRF2Q9HAW0 419 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 LRTM1Q9HBL6 345 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 PRM3Q9NNZ6 103 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 TMEM184CQ9NVA4 438 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 ARL8BQ9NVJ2 186 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 C1orf109Q9NX04 203 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 SNX7Q9UNH6 387 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 TSC22D4Q9Y3Q8 395 aa10.78□□□□□ -0.68
USP3-218ENST00000560202 FEZF1A0PJY2 475 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 OR5K3A6NET4 321 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 FOXE1O00358 373 aaPredicted RBP10.77□□□□□ -0.69
USP3-218ENST00000560202 YKT6O15498 198 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 SEC22BO75396 215 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 T-ENOLP0DO92 83 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 IDO1P14902 403 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 TYRP1P17643 537 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 PIK3R1P27986 724 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 PIK3CBP42338 1070 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 DIO3P55073 304 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 SH3BGRP55822 239 aaPredicted RBP10.77□□□□□ -0.69
USP3-218ENST00000560202 STX1BP61266 288 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 RPS13P62277 151 aaKnown RBP10.77□□□□□ -0.69
USP3-218ENST00000560202 RPL38P63173 70 aaKnown RBP10.77□□□□□ -0.69
USP3-218ENST00000560202 GSTA3Q16772 222 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 KANSL1Q7Z3B3 1105 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 ZFAND4Q86XD8 727 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 GATAD2AQ86YP4 633 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 ARL10Q8N8L6 244 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 SAP25Q8TEE9 199 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 CMTM7Q96FZ5 175 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 NSL1Q96IY1 281 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 LOXL4Q96JB6 756 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 ZNF570Q96NI8 536 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 SLC38A3Q99624 504 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 C1orf50Q9BV19 199 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 RHBGQ9H310 441 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 GAREM1Q9H706 876 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 IL21RQ9HBE5 538 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 DMRT3Q9NQL9 472 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 AIG1Q9NVV5 245 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 VPS29Q9UBQ0 182 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 ADGRE2Q9UHX3 823 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 LRRC42Q9Y546 428 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 GPR45Q9Y5Y3 372 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 DNAH14Q0VDD8 3507 aa10.77□□□□□ -0.69
USP3-218ENST00000560202 TRBC2A0A5B9 178 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ANKDD1BA6NHY2 528 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 LILRA5A6NI73 299 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 RHPN2P1A8MT19 583 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms