RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ACSBG2Q5FVE4 666 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 THEMIS2Q5TEJ8 643 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 MFSD4BQ5TF39 518 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 MEI1Q5TIA1 1274 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 NEPROQ6NW34 567 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 DRICH1Q6PGQ1 229 aaPredicted RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 NEK10Q6ZWH5 1172 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 CPEB2Q7Z5Q1 589 aaKnown RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 FBXO15Q8NCQ5 510 aaPredicted RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 MAIP1Q8WWC4 291 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 FAM136AQ96C01 138 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 THAP11Q96EK4 314 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 CCDC120Q96HB5 630 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 CYTH2Q99418 400 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 PKP4Q99569 1192 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 CCDC68Q9H2F9 335 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 TMEM184CQ9NVA4 438 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 KLHL42Q9P2K6 505 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 TSR3Q9UJK0 312 aaKnown RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 SOX13Q9UN79 622 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 ZKSCAN5Q9Y2L8 839 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 PCDHGB6Q9Y5F9 930 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 PRRC2CQ9Y520 2896 aaKnown RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 IGKV1-8A0A0C4DH67 115 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 MAGEB16A2A368 324 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 GOLGA8KD6RF30 607 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 E7ENX8 843 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 GOLGA8TH3BQL2 631 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 H7BY64 318 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SMAPO00193 183 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SLC19A2O60779 497 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 NSA2O95478 260 aaKnown RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SLC16A8O95907 504 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SYF2O95926 243 aaKnown RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 CELA2AP08217 269 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 AGAP20933 346 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ARNTP27540 789 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 AGTR2P50052 363 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 RPS15AP62244 130 aaKnown RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 TAP2Q03519 686 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 PTK6Q13882 451 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SYT16Q17RD7 645 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 BTBD16Q32M84 506 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 MINDY4Q4G0A6 757 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF766Q5HY98 468 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ACER2Q5QJU3 275 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 PLAG1Q6DJT9 500 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 KIAA0930Q6ICG6 404 aaPredicted RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 CASC4Q6P4E1 433 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 CES3Q6UWW8 571 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ZC3H7AQ8IWR0 971 aaKnown RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 REXO1L1PQ8IX06 675 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 HORMAD2Q8N7B1 307 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 OR51Q1Q8NH59 317 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF480Q8WV37 535 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ASB11Q8WXH4 323 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 PRAP1Q96NZ9 151 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 FAM129AQ9BZQ8 928 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 VN1R1Q9GZP7 353 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 PCBD2Q9H0N5 130 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 KCNK13Q9HB14 408 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 HOMER3Q9NSC5 361 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 ABCF3Q9NUQ8 709 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 INTS10Q9NVR2 710 aaKnown RBP8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SAMD15Q9P1V8 674 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 SH3BGRL2Q9UJC5 107 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 GUCA1BQ9UMX6 200 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 CAPN6Q9Y6Q1 641 aa8.68□□□□□ -1.02
HDDC3-204ENST00000559834 KCNE1BA0A087WTH5 132 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 A0A0U1RQJ8 604 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CTAGE9A4FU28 777 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 GFYI3L273 518 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CDK2AP1O14519 115 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 HAT1O14929 419 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 KIF5CO60282 957 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 SEC24DO94855 1032 aaPredicted RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 MPC1LP0DKB6 136 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CD46P15529 392 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 TPSB2P20231 275 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 IL10P22301 178 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CLCN7P51798 805 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 MAT1AQ00266 395 aaKnown RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 ALDH6A1Q02252 535 aaKnown RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 ACTN3Q08043 901 aaPredicted RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 THOC5Q13769 683 aaKnown RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 TPSAB1Q15661 275 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 EXT1Q16394 746 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 MEP1AQ16819 746 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 H3F3CQ6NXT2 135 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CENPUQ71F23 418 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 PCGF5Q86SE9 256 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CILP2Q8IUL8 1156 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 TMEM139Q8IV31 216 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms