RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 LRRC49Q8IUZ0 686 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ZNF547Q8IVP9 402 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 NAGSQ8N159 534 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SLC35F6Q8N357 371 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SDR16C5Q8N3Y7 309 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ARL14Q8N4G2 192 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 DENND6BQ8NEG7 585 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 OR56A4Q8NGH8 313 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 OR52K1Q8NGK4 314 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 OR56A3Q8NH54 315 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 BLOC1S5Q8TDH9 187 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SGF29Q96ES7 293 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 RBM41Q96IZ5 413 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 QKIQ96PU8 341 aaKnown RBP eCLIP4.16□□□□□ -1.74
SPG11-211ENST00000558561 LYSMD1Q96S90 227 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 AMBRA1Q9C0C7 1298 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 MS4A7Q9GZW8 240 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 OR2AG1Q9H205 316 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 RDH14Q9HBH5 336 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 IL26Q9NPH9 171 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PRDM8Q9NQV8 689 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 DONSONQ9NYP3 566 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 IL17CQ9P0M4 197 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 KLHL8Q9P2G9 620 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 SPASTQ9UBP0 616 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 KLQ9UEF7 1012 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SLC2A6Q9UGQ3 507 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 APOBEC3BQ9UH17 382 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 FAM153AQ9UHL3 310 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 RSPH14Q9UHP6 348 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ZNHIT2Q9UHR6 403 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PADI4Q9UM07 663 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 GPR34Q9UPC5 381 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 KCNK6Q9Y257 313 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SLC17A4Q9Y2C5 497 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 WDR37Q9Y2I8 494 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ZNF711Q9Y462 761 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PRSS21Q9Y6M0 314 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 RNF215Q9Y6U7 377 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CEP295Q9C0D2 2601 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 USP24Q9UPU5 2620 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 COL5A1P20908 1838 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 KMT2BQ9UMN6 2715 aaPredicted RBP4.15□□□□□ -1.74
SPG11-211ENST00000558561 ANKRD12Q6UB98 2062 aa4.15□□□□□ -1.74
SPG11-211ENST00000558561 ACACAQ13085 2346 aa4.15□□□□□ -1.74
SPG11-211ENST00000558561 GOLGA6L3A6NEY3 463 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 C5orf60A6NFR6 353 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SRRM3A6NNA2 597 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 A8MU76 341 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 B4DGG1 531 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 F8W8V4 182 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 CACNB4O00305 520 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 LDB2O43679 373 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TRIAP1O43715 76 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 LIASO43766 372 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 AKAP8O43823 692 aaKnown RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 CEP104O60308 925 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DFNA5O60443 496 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 MAGEC1O60732 1142 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SNX2O60749 519 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 AVILO75366 819 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SLPIP03973 132 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 PROS1P07225 676 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ANXA6P08133 673 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 HOXC4P09017 264 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 HKR1P10072 659 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ITIH1P19827 911 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 NUDT1P36639 197 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ETV5P41161 510 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SUOXP51687 545 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 PGGT1BP53609 377 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DRG2P55039 364 aaKnown RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 KIAA1024LP59773 190 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 HNRNPKP61978 463 aaKnown RBP eCLIP4.15□□□□□ -1.75
SPG11-211ENST00000558561 RPS16P62249 146 aaKnown RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 CRADDP78560 199 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DPTQ07507 201 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TMEM115Q12893 351 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 FOXI1Q12951 378 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 XRCC4Q13426 336 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 PTK2BQ14289 1009 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SEMA3AQ14563 771 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 CLCA4Q14CN2 919 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 RPS6KA1Q15418 735 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TGIF1Q15583 401 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ST3GAL2Q16842 350 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ZIK1Q3SY52 487 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 AMZ1Q400G9 498 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 MAP9Q49MG5 647 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ODF2Q5BJF6 829 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ANKRD22Q5VYY1 191 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 VWA1Q6PCB0 445 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 FBXO38Q6PIJ6 1188 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TMEM220Q6QAJ8 160 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 FAM151BQ6UXP7 276 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 CERS6Q6ZMG9 384 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DET1Q7L5Y6 550 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 C11orf96Q7Z7L8 435 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 LDB1Q86U70 411 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 C17orf82Q86X59 251 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms