RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MMP11P24347 488 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 HRH2P25021 359 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SOX8P57073 446 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SNRPNP63162 240 aaKnown RBP8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 CSNK1G2P78368 415 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 IGFBP7Q16270 282 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 HKDC1Q2TB90 917 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 GARNL3Q5VVW2 1013 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 PRAMEF13Q5VWM6 474 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 PRMT9Q6P2P2 845 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 KIRREL2Q6UWL6 708 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SHISA6Q6ZSJ9 500 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF572Q7Z3I7 529 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 VN1R4Q7Z5H5 301 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 ADCK2Q7Z695 626 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 STRA8Q7Z7C7 330 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SLC26A11Q86WA9 606 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 PALM2Q8IXS6 379 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 ZBED8Q8IZ13 594 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 PYROXD1Q8WU10 500 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 NACC2Q96BF6 587 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 CABS1Q96KC9 395 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 FER1L6-AS2Q96M78 137 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SMAD5Q99717 465 aaKnown RBP8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 PCBD2Q9H0N5 130 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 CLMPQ9H6B4 373 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SOX17Q9H6I2 414 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF304Q9HCX3 659 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SAYSD1Q9NPB0 183 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 CCDC177Q9NQR7 707 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF451Q9Y4E5 1061 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 HS3ST3B1Q9Y662 390 aa8.36□□□□□ -1.07
SNRPA1-206ENST00000558059 SPTBN1Q01082 2364 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ZGRF1Q86YA3 2104 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 SPTAN1Q13813 2472 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 KCNE1BA0A087WTH5 132 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 FAM95CA0A1B0GW59 222 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 CXorf49A8MYA2 514 aaPredicted RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 AGPSO00116 658 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 EIF3HO15372 352 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 LCMT2O60294 686 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 IGHEP01854 428 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 C1QAP02745 245 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 HIST1H2AGP0C0S8 130 aaPredicted RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 NPPBP16860 134 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 HIST1H2ADP20671 130 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 SSTR1P30872 391 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 SLC26A3P40879 764 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 AP1S2P56377 157 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 TAS2R39P59534 338 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 PRR20EP86478 221 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 PRR20CP86479 221 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 PRR20DP86480 221 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 PRR20BP86481 221 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 PRR20AP86496 221 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 KLC1Q07866 573 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 CALCOCO2Q13137 446 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 RAPSNQ13702 412 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF460Q14592 562 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 TRADDQ15628 312 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 NADK2Q4G0N4 442 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 VWA2Q5GFL6 755 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 SBSNQ6UWP8 590 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 CYS1Q717R9 158 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 C17orf64Q86WR6 236 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 GALNT16Q8N428 558 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 RBMXL3Q8N7X1 1067 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 AMER3Q8N944 861 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 OR56A3Q8NH54 315 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 STT3BQ8TCJ2 826 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 RERGQ96A58 199 aaPredicted RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 FBXL8Q96CD0 374 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 MVB12AQ96EY5 273 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 HIST1H2AHQ96KK5 128 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 OR4K3Q96R72 315 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 HIST1H2AJQ99878 128 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 MESP1Q9BRJ9 268 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 H2AFJQ9BTM1 129 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 RHOJQ9H4E5 214 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF552Q9H707 407 aaPredicted RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ATP13A2Q9NQ11 1180 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ARL15Q9NXU5 204 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 GPR83Q9NYM4 423 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF282Q9UDV7 671 aaPredicted RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 CDC23Q9UJX2 597 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 FBXL4Q9UKA2 621 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 NXT1Q9UKK6 140 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 CDC14AQ9UNH5 594 aa8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 MRPS2Q9Y399 296 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-206ENST00000558059 POLEQ07864 2286 aa8.34□□□□□ -1.07
SNRPA1-206ENST00000558059 FEZF1A0PJY2 475 aa8.34□□□□□ -1.07
SNRPA1-206ENST00000558059 CDC7O00311 574 aa8.34□□□□□ -1.07
SNRPA1-206ENST00000558059 TXNDC9O14530 226 aa8.34□□□□□ -1.07
SNRPA1-206ENST00000558059 FFAR3O14843 346 aa8.34□□□□□ -1.07
SNRPA1-206ENST00000558059 GPR42O15529 346 aa8.34□□□□□ -1.07
SNRPA1-206ENST00000558059 DPM1O60762 260 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms