RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 VSTM2BA6NLU5 285 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 C2orf81A6NN90 581 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ISM1B1AKI9 464 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 M0R3H8 397 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 DSCR3O14972 297 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PRICKLE3O43900 615 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 SNRNP200O75643 2136 aaKnown RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 WISP2O76076 250 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 USP1O94782 785 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ALX3O95076 343 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 HPP00738 406 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 F10P00742 488 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 H2AFZP0C0S5 128 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PRR35P0CG20 571 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PRSS56P0CW18 603 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ITGALP20701 1170 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 CAPN3P20807 821 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ACRV1P26436 265 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ACADLP28330 430 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ADRA1AP35348 466 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PBX1P40424 430 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 CDKN2BP42772 138 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 KIR3DL1P43629 444 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 OR1D4P47884 311 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 NR2C2P49116 596 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF140P52738 457 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ARSFP54793 590 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 OCRLQ01968 901 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 KLC1Q07866 573 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 MSLNQ13421 630 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 MTFR2Q6P444 385 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF449Q6P9G9 518 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 XKRXQ6PP77 449 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 MFSD7Q6UXD7 560 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 H2AFVQ71UI9 128 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PID1Q7Z2X4 250 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 SNX20Q7Z614 316 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 MCATQ8IVS2 390 aaKnown RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PRSS58Q8IYP2 241 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 CLDN19Q8N6F1 224 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 SIRT6Q8N6T7 355 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 LMNTD1Q8N9Z9 388 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 OR5K2Q8NHB8 316 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 BRIX1Q8TDN6 353 aaKnown RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 HEXDCQ8WVB3 486 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 CTNNBL1Q8WYA6 563 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PSMF1Q92530 271 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 HDAC2Q92769 488 aaKnown RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 C8orf44Q96CB5 159 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 MEGF10Q96KG7 1140 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 DHRS1Q96LJ7 313 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 APOL2Q9BQE5 337 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 GBA3Q9H227 469 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 VPS37BQ9H9H4 285 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF160Q9HCG1 818 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 CUTCQ9NTM9 273 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 OR6C2Q9NZP2 312 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 SAMD15Q9P1V8 674 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ABI3Q9P2A4 366 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 PTGFRNQ9P2B2 879 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 REV1Q9UBZ9 1251 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 SEC14L3Q9UDX4 400 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 RSPH14Q9UHP6 348 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 LCMT1Q9UIC8 334 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ACAD8Q9UKU7 415 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 ASF1AQ9Y294 204 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 TDRKHQ9Y2W6 561 aaKnown RBP5.58□□□□□ -1.52
VPS33B-207ENST00000557470 MAU2Q9Y6X3 613 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 TRBV5-4A0A0C4DH59 114 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 MAP2K7O14733 419 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 LIN7AO14910 233 aaPredicted RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CST8O60676 142 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 SLC19A2O60779 497 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 MED26O95402 600 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CRTAMO95727 393 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CRYABP02511 175 aaKnown RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CELA2AP08217 269 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 PIM1P11309 404 aaPredicted RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 COX6A1P12074 109 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 TNNT1P13805 278 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 AGAP20933 346 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 PKLRP30613 574 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 MC4RP32245 332 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 GRIA3P42263 894 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 GEMP55040 296 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 SESN3P58005 492 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 MPP1Q00013 466 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 PMP22Q01453 160 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 GRM7Q14831 915 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 KIR2DS3Q14952 304 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 NR1I3Q14994 352 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 C3AR1Q16581 482 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 LRRC38Q5VT99 294 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 ATG9BQ674R7 924 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 KAZNQ674X7 775 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 RANBP10Q6VN20 620 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 NAPRTQ6XQN6 538 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 ARHGEF18Q6ZSZ5 1173 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 BZW1Q7L1Q6 419 aaKnown RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 NLRP9Q7RTR0 991 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms