RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GPN3Q9UHW5 284 aaPredicted RBP13.03□□□□□ -0.32
SNX6-203ENST00000555416 OARD1Q9Y530 152 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 PYCARD-AS1I3L0S3 204 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 ENO2P09104 434 aaPredicted RBP13.02□□□□□ -0.33
SNX6-203ENST00000555416 SLC35E2BP0CK96 405 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 FOLR3P41439 243 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 GDF5P43026 501 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 BMPR2Q13873 1038 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 OR4D1Q15615 310 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 NKG7Q16617 165 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 FAM214AQ32MH5 1076 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 FBXO48Q5FWF7 155 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 GRTP1Q5TC63 336 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 YOD1Q5VVQ6 348 aaPredicted RBP13.02□□□□□ -0.33
SNX6-203ENST00000555416 CAPN13Q6MZZ7 669 aaPredicted RBP13.02□□□□□ -0.33
SNX6-203ENST00000555416 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 MRGPREQ86SM8 312 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 APLFQ8IW19 511 aaPredicted RBP13.02□□□□□ -0.33
SNX6-203ENST00000555416 ABHD11Q8NFV4 315 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 ANKRD7Q92527 254 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 NEIL2Q969S2 332 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 FKBP10Q96AY3 582 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 CABS1Q96KC9 395 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 UBXN10Q96LJ8 280 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 TRIM54Q9BYV2 358 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 PCBD2Q9H0N5 130 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 ING2Q9H160 280 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 CDC42EP4Q9H3Q1 356 aaKnown RBP13.02□□□□□ -0.33
SNX6-203ENST00000555416 SOX17Q9H6I2 414 aaPredicted RBP13.02□□□□□ -0.33
SNX6-203ENST00000555416 TXNDC16Q9P2K2 825 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 TUBD1Q9UJT1 453 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 TP53TG5Q9Y2B4 290 aa13.02□□□□□ -0.33
SNX6-203ENST00000555416 TNRC6AQ8NDV7 1962 aaKnown RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 KCNE1BA0A087WTH5 132 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 A0A0A6YYC8 382 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 NCF1BA6NI72 391 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 VSTM2BA6NLU5 285 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 NCF1CA8MVU1 366 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 B8ZZF3 427 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 I3L1I5 382 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 TAPBPO15533 448 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 RFPL1O75677 317 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 NCF1P14598 390 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 CD1DP15813 335 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 STMN1P16949 149 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SPRP35270 261 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 CSRP3P50461 194 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 CCL11P51671 97 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 EFNA3P52797 238 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SLC12A2P55011 1212 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 RAB10P61026 200 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 CSHL1Q14406 222 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SSPNQ14714 243 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SLMAPQ14BN4 828 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SYT16Q17RD7 645 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 MUM1Q2TAK8 710 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 THOC6Q86W42 341 aaKnown RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 RELL1Q8IUW5 271 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 PRSS58Q8IYP2 241 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 AMER3Q8N944 861 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 OR4K1Q8NGD4 311 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 C9orf43Q8TAL5 461 aaPredicted RBP13.01□□□□□ -0.33
SNX6-203ENST00000555416 ESAMQ96AP7 390 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 RHBDF1Q96CC6 855 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 MOCOSQ96EN8 888 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 TSPAN17Q96FV3 270 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 FMO2Q99518 471 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 C17orf62Q9BQA9 187 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 TMEM79Q9BSE2 394 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SLC26A1Q9H2B4 701 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 ZNF304Q9HCX3 659 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 SLC22A14Q9Y267 594 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 PADI2Q9Y2J8 665 aa13.01□□□□□ -0.33
SNX6-203ENST00000555416 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
SNX6-203ENST00000555416 PRAMEF4O60810 478 aa13□□□□□ -0.33
SNX6-203ENST00000555416 ALOX12BO75342 701 aa13□□□□□ -0.33
SNX6-203ENST00000555416 ACSL3O95573 720 aa13□□□□□ -0.33
SNX6-203ENST00000555416 ALBP02768 609 aa13□□□□□ -0.33
SNX6-203ENST00000555416 CCND1P24385 295 aa13□□□□□ -0.33
SNX6-203ENST00000555416 HRH2P25021 359 aa13□□□□□ -0.33
SNX6-203ENST00000555416 EMP3P54852 163 aa13□□□□□ -0.33
SNX6-203ENST00000555416 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
SNX6-203ENST00000555416 MAT1AQ00266 395 aaKnown RBP13□□□□□ -0.33
SNX6-203ENST00000555416 CDKL1Q00532 357 aa13□□□□□ -0.33
SNX6-203ENST00000555416 IRF9Q00978 393 aa13□□□□□ -0.33
SNX6-203ENST00000555416 NAB1Q13506 487 aa13□□□□□ -0.33
SNX6-203ENST00000555416 TGFBIQ15582 683 aa13□□□□□ -0.33
SNX6-203ENST00000555416 VWA2Q5GFL6 755 aa13□□□□□ -0.33
SNX6-203ENST00000555416 MROH9Q5TGP6 573 aa13□□□□□ -0.33
SNX6-203ENST00000555416 PRAMEF9Q5VWM5 478 aa13□□□□□ -0.33
SNX6-203ENST00000555416 ADAMTSL2Q86TH1 951 aa13□□□□□ -0.33
SNX6-203ENST00000555416 AMER2Q8N7J2 671 aa13□□□□□ -0.33
SNX6-203ENST00000555416 KCT2Q8NC54 265 aa13□□□□□ -0.33
SNX6-203ENST00000555416 UHMK1Q8TAS1 419 aaKnown RBP13□□□□□ -0.33
SNX6-203ENST00000555416 ATL1Q8WXF7 558 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms