RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ELOCQ15369 112 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 RPE65Q16518 533 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 C18orf21Q32NC0 220 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF542PQ5EBM4 170 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 FBXO48Q5FWF7 155 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 SLC30A9Q6PML9 568 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 RBM44Q6ZP01 1051 aaKnown RBP13.95□□□□□ -0.18
SHMT2-208ENST00000553868 RPS27LQ71UM5 84 aaKnown RBP13.95□□□□□ -0.18
SHMT2-208ENST00000553868 MILR1Q7Z6M3 343 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 TAF8Q7Z7C8 310 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 AVL9Q8NBF6 648 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 AGR3Q8TD06 166 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 ZFPM2Q8WW38 1151 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 MOCOSQ96EN8 888 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 MIPEPQ99797 713 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 CCT7Q99832 543 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 TMEM120AQ9BXJ8 343 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 PCBD2Q9H0N5 130 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 ATG10Q9H0Y0 220 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF768Q9H5H4 540 aaKnown RBP13.95□□□□□ -0.18
SHMT2-208ENST00000553868 CCDC177Q9NQR7 707 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-208ENST00000553868 GPRC5BQ9NZH0 403 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 WDR37Q9Y2I8 494 aa13.95□□□□□ -0.18
SHMT2-208ENST00000553868 KIR2DS5A0A0G2JLQ3 304 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 A0A0G2JNG1 304 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 KIR2DS3K7RE56 304 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 UBFD1O14562 309 aaKnown RBP13.94□□□□□ -0.18
SHMT2-208ENST00000553868 CLGNO14967 610 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 UROSP10746 265 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 HGFP14210 728 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 AK4P27144 223 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-208ENST00000553868 GDF5P43026 501 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 KIR2DS5Q14953 304 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 CCSMST1Q4G0I0 132 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 KANK2Q63ZY3 851 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 ACAD11Q709F0 780 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 THOC6Q86W42 341 aaKnown RBP13.94□□□□□ -0.18
SHMT2-208ENST00000553868 GKN2Q86XP6 184 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 TRIM48Q8IWZ4 208 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF480Q8WV37 535 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 CCT6BQ92526 530 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 RILPQ96NA2 401 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 NTMT1Q9BV86 223 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 SLC29A3Q9BZD2 475 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 ACTR8Q9H981 624 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 ZBTB26Q9HCK0 441 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 TAAR2Q9P1P5 351 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 TRPS1Q9UHF7 1281 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 DYRK1BQ9Y463 629 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 ASB1Q9Y576 335 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 CFAP20Q9Y6A4 193 aaKnown RBP13.94□□□□□ -0.18
SHMT2-208ENST00000553868 KCNE2Q9Y6J6 123 aa13.94□□□□□ -0.18
SHMT2-208ENST00000553868 MED13Q9UHV7 2174 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 CCDC187A0A096LP49 1063 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 AGRPO00253 132 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 OR7A17O14581 309 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 UGDHO60701 494 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 DIAPH2O60879 1101 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 CLDN9O95484 217 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 ERGP11308 486 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 HMOX2P30519 316 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 TBPL1P62380 186 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.181e-13■■■□□ 16.4
SHMT2-208ENST00000553868 PRKG2Q13237 762 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 PDCD2Q16342 344 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-208ENST00000553868 CYP2A13Q16696 494 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 PRRT3Q5FWE3 981 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 MANEAQ5SRI9 462 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 PERM1Q5SV97 790 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 EPGNQ6UW88 154 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 SYVN1Q86TM6 617 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 NRROSQ86YC3 692 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 CCL4L1Q8NHW4 92 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 SMPDL3AQ92484 453 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 HAUS8Q9BT25 410 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 SGPP1Q9BX95 441 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 KIR3DX1Q9H7L2 352 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 KCNK13Q9HB14 408 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF71Q9NQZ8 489 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-208ENST00000553868 POT1Q9NUX5 634 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 NLGN3Q9NZ94 848 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 PNMA8BQ9ULN7 279 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-208ENST00000553868 DOLKQ9UPQ8 538 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 SLC22A14Q9Y267 594 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 FIS1Q9Y3D6 152 aa13.93□□□□□ -0.18
SHMT2-208ENST00000553868 A6NCN8 305 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 OR52A4PA6NMU1 304 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 E7ENX8 843 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 CCDC22O60826 627 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 VPS4BO75351 444 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 OR4F21O95013 312 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 AGFG2O95081 481 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 ALPPL2P10696 532 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 GNAZP19086 355 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 ELAVL4P26378 380 aaKnown RBP13.92□□□□□ -0.18
SHMT2-208ENST00000553868 SHMT2P34897 504 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 UQCRFS1P47985 274 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 IDH3AP50213 366 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 RAB28P51157 221 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms