RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 TTLL9Q3SXZ7 439 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 ACSBG2Q5FVE4 666 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 ABHD17BQ5VST6 288 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 HIBCHQ6NVY1 386 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-218ENST00000548945 TMEM207Q6UWW9 146 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 GFRALQ6UXV0 394 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 RPTNQ6XPR3 784 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 CILP2Q8IUL8 1156 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 ZC3H7AQ8IWR0 971 aaKnown RBP12.19□□□□□ -0.46
PTCH1-218ENST00000548945 MAIP1Q8WWC4 291 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 IMMP1LQ96LU5 166 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 PKP4Q99569 1192 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 YIPF2Q9BWQ6 316 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 UNKQ9C0B0 810 aaKnown RBP12.19□□□□□ -0.46
PTCH1-218ENST00000548945 KCNF1Q9H3M0 494 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 SYNPO2LQ9H987 977 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 INTS10Q9NVR2 710 aaKnown RBP12.19□□□□□ -0.46
PTCH1-218ENST00000548945 SYBUQ9NX95 663 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 TAC3Q9UHF0 121 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 PCDHGB6Q9Y5F9 930 aa12.19□□□□□ -0.46
PTCH1-218ENST00000548945 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 A0A0A6YYC8 382 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-218ENST00000548945 OR5H15A6NDH6 313 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 E5RI56 91 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 E7ENX8 843 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 H0YIG0 161 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 I3L1I5 382 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-218ENST00000548945 PRAMEF2O60811 474 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 SLC16A8O95907 504 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 C8orf89P0DMQ9 161 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 ITGAMP11215 1152 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 HRH2P25021 359 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 PTGER4P35408 488 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 AVPR1BP47901 424 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 CLCN7P51798 805 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 SARNPP82979 210 aaKnown RBP12.18□□□□□ -0.46
PTCH1-218ENST00000548945 TAP2Q03519 686 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 RBPJQ06330 500 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 NEPROQ6NW34 567 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 CENPUQ71F23 418 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 GSTA5Q7RTV2 222 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 REXO1L1PQ8IX06 675 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 MCEMP1Q8IX19 187 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 ZNF808Q8N4W9 903 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-218ENST00000548945 ZNF480Q8WV37 535 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 ITLN2Q8WWU7 325 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-218ENST00000548945 METTL21AQ8WXB1 218 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 ASB11Q8WXH4 323 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 CHST11Q9NPF2 352 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 HOMER3Q9NSC5 361 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 SEC14L3Q9UDX4 400 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 PCYOX1Q9UHG3 505 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 CRYL1Q9Y2S2 319 aa12.18□□□□□ -0.46
PTCH1-218ENST00000548945 KCNE1BA0A087WTH5 132 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 GOLGA8TH3BQL2 631 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 GFYI3L273 518 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 SMAPO00193 183 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 FFAR3O14843 346 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 HAT1O14929 419 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 GPR42O15529 346 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 UNC5CO95185 931 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 NSA2O95478 260 aaKnown RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 CELA2AP08217 269 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 MPC1LP0DKB6 136 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 ENO3P13929 434 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 SKIV2L2P42285 1042 aaKnown RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 CA7P43166 264 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 MAGEA6P43360 314 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 CCZ1BP86790 482 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 CCZ1P86791 482 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 TSTA3Q13630 321 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 KCNJ11Q14654 390 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 PLAG1Q6DJT9 500 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 FAAH2Q6GMR7 532 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 H3F3CQ6NXT2 135 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 CES3Q6UWW8 571 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 BNC2Q6ZN30 1099 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 PCGF5Q86SE9 256 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 KCNJ9Q92806 393 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 FAM136AQ96C01 138 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 CCDC120Q96HB5 630 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 VN1R1Q9GZP7 353 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 STMN3Q9NZ72 180 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 GALPQ9UBC7 116 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 C19orf25Q9UFG5 118 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
PTCH1-218ENST00000548945 GUCA1BQ9UMX6 200 aa12.17□□□□□ -0.46
PTCH1-218ENST00000548945 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 MAGEB16A2A368 324 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 EIF3FO00303 357 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-218ENST00000548945 CCL21O00585 134 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 P2RX6O15547 441 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 KIF5CO60282 957 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 MST1P26927 711 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 EFNA3P52797 238 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 CASP6P55212 293 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 RPS15AP62244 130 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms