RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CTSBP07858 339 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SBK3P0C264 359 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 C1GALT1C1LP0DN25 315 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SLCO1A2P46721 670 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 HSPA7P48741 367 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.2
DDX54-203ENST00000546869 IFFO1Q0D2I5 559 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 GPS2Q13227 327 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 TBCCQ15814 346 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 C18orf21Q32NC0 220 aaPredicted RBP13.83□□□□□ -0.2
DDX54-203ENST00000546869 PRAMEF17Q5VTA0 474 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SLCO4C1Q6ZQN7 724 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 ADCK2Q7Z695 626 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 IQCKQ8N0W5 287 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 TBC1D19Q8N5T2 526 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 IL22RA1Q8N6P7 574 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 ZNF655Q8N720 491 aaPredicted RBP13.83□□□□□ -0.2
DDX54-203ENST00000546869 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
DDX54-203ENST00000546869 CLIP3Q96DZ5 547 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SEC16BQ96JE7 1060 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 NDC1Q9BTX1 674 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 GPR87Q9BY21 358 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 FREM2Q5SZK8 3169 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 AHCTF1Q8WYP5 2266 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SDK2Q58EX2 2172 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 LOC101059948A0A1B0GTJ6 334 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 TEX51A0A1B0GUA7 166 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 A0A1W2PPM1 405 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 HYKKA2RU49 373 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 K7EPI3 171 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 CLGNO14967 610 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 LCMT2O60294 686 aaKnown RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 H2AFYO75367 372 aaKnown RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 CD63P08962 238 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 RAB40ALP0C0E4 278 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 PYGBP11216 843 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 GFAPP14136 432 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 KRT15P19012 456 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 GSTM2P28161 218 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 CRHR1P34998 444 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 AHRP35869 848 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 SCTRP47872 440 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 CCT5P48643 541 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 SLC18A2Q05940 514 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 PWP1Q13610 501 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 PDK4Q16654 411 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 PFKFB4Q16877 469 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 CRTC2Q53ET0 693 aaPredicted RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 CATSPEREQ5SY80 951 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 VN1R4Q7Z5H5 301 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 CROCCP2Q86T23 111 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 ARHGEF39Q8N4T4 335 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 OR2W6PQ8NHA6 318 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 KIAA1143Q96AT1 154 aaPredicted RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 MVB12AQ96EY5 273 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 PTCD3Q96EY7 689 aaKnown RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 NAF1Q96HR8 494 aaKnown RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 GBP5Q96PP8 586 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 C17orf62Q9BQA9 187 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 AIF1LQ9BQI0 150 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 C1QTNF3Q9BXJ4 246 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 NLNQ9BYT8 704 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 SLC7A5P2Q9GIP4 190 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 SYNPO2LQ9H987 977 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
DDX54-203ENST00000546869 CUTCQ9NTM9 273 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 TMEM216Q9P0N5 145 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 XPR1Q9UBH6 696 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 OPTCQ9UBM4 332 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 KCND3Q9UK17 655 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 PLAAQ9Y263 795 aa13.82□□□□□ -0.2
DDX54-203ENST00000546869 SNRNP200O75643 2136 aaKnown RBP13.81□□□□□ -0.2
DDX54-203ENST00000546869 A0A1B0GX78 115 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 TLDC2A0PJX2 215 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 DSCR3O14972 297 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 EFSO43281 561 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
DDX54-203ENST00000546869 CCNT2O60583 730 aaKnown RBP13.81□□□□□ -0.2
DDX54-203ENST00000546869 SMIM24O75264 130 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 WFS1O76024 890 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 EPB42P16452 691 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 EPORP19235 508 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 AGXTP21549 392 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 ITPKBP27987 946 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 BCL6P41182 706 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 PIK3CGP48736 1102 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 DCDP81605 110 aaKnown RBP13.81□□□□□ -0.2
DDX54-203ENST00000546869 NFKB2Q00653 900 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 REEP5Q00765 189 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 LAPTM5Q13571 262 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 FAM53BQ14153 422 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 MUM1Q2TAK8 710 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 PRMT9Q6P2P2 845 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 CSNK1A1LQ8N752 337 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 CAMKVQ8NCB2 501 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 TTLQ8NG68 377 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms