RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MKL2Q9ULH7 1088 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 CRYL1Q9Y2S2 319 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 PCDHGB6Q9Y5F9 930 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 TRGV8A0A0C4DH27 118 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 GOLGA8KD6RF30 607 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 GOLGA8TH3BQL2 631 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 SMAPO00193 183 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 FFAR3O14843 346 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 GPR42O15529 346 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 UNC5CO95185 931 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 NSA2O95478 260 aaKnown RBP11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 SLC16A8O95907 504 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 CELA2AP08217 269 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 MPC1LP0DKB6 136 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 ENO3P13929 434 aaPredicted RBP11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 CLCN7P51798 805 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 SARNPP82979 210 aaKnown RBP11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 TSTA3Q13630 321 aaPredicted RBP11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 KCNJ11Q14654 390 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 MEI1Q5TIA1 1274 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 NEPROQ6NW34 567 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 CES3Q6UWW8 571 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 CENPUQ71F23 418 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 LRRC56Q8IYG6 542 aaPredicted RBP11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 MCOLN3Q8TDD5 553 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 METTL21AQ8WXB1 218 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 KCNJ9Q92806 393 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 FAM136AQ96C01 138 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 CCDC120Q96HB5 630 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 RBSNQ9H1K0 784 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 STMN3Q9NZ72 180 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 GALPQ9UBC7 116 aa11.37□□□□□ -0.59
CBX3P4-202ENST00000540428 SVILO95425 2214 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 KCNE1BA0A087WTH5 132 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 GFYI3L273 518 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 CCL21O00585 134 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 HAT1O14929 419 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 P2RX6O15547 441 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 ZBTB14O43829 449 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 KIF5CO60282 957 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 F10P00742 488 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 MST1P26927 711 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 SKIV2L2P42285 1042 aaKnown RBP11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 MAGEA6P43360 314 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 EFNA3P52797 238 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 CASP6P55212 293 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 RPS15AP62244 130 aaKnown RBP11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 MAT1AQ00266 395 aaKnown RBP11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF33BQ06732 778 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 PTK6Q13882 451 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 SYT16Q17RD7 645 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF630Q2M218 657 aaPredicted RBP11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 PLAG1Q6DJT9 500 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 H3F3CQ6NXT2 135 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 XKRXQ6PP77 449 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 CPEB2Q7Z5Q1 589 aaKnown RBP11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 ADCK2Q7Z695 626 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 PCGF5Q86SE9 256 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 MRGPRGQ86SM5 289 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 PPFIBP2Q8ND30 876 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 ASB11Q8WXH4 323 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF354BQ96LW1 612 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 VN1R1Q9GZP7 353 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 HOMER3Q9NSC5 361 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 TMEM184CQ9NVA4 438 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 GUCA1BQ9UMX6 200 aa11.36□□□□□ -0.59
CBX3P4-202ENST00000540428 LRBAP50851 2863 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 FAM237BA0A1B0GVD1 139 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 TCRBV7S3A2A0A539 114 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 MAGEB16A2A368 324 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 H7BY64 318 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 EIF3FO00303 357 aaPredicted RBP11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 CDK2AP1O14519 115 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 MLYCDO95822 493 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 AGAP20933 346 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 CDC25BP30305 580 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 AGTR2P50052 363 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF766Q5HY98 468 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 THEMIS2Q5TEJ8 643 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF470Q6ECI4 717 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 CYHR1Q6ZMK1 362 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 VN1R4Q7Z5H5 301 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 LMNTD2Q8IXW0 634 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 PRELID2Q8N945 189 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 OR51Q1Q8NH59 317 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 THAP3Q8WTV1 239 aaPredicted RBP11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 PRAP1Q96NZ9 151 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 CYTH2Q99418 400 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 FAM129AQ9BZQ8 928 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 PCBD2Q9H0N5 130 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 CCDC68Q9H2F9 335 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms