RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 QPRTQ15274 297 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF630Q2M218 657 aaPredicted RBP14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 RTL4Q6ZR62 310 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 RANBP3LQ86VV4 465 aaPredicted RBP14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 COX4I2Q96KJ9 171 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 RSPH9Q9H1X1 276 aaPredicted RBP14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 TM9SF3Q9HD45 589 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 NEUROD4Q9HD90 331 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 PHIPQ8WWQ0 1821 aa14.86□□□□□ -0.03
PCDHA3-202ENST00000532566 MATN4O95460 622 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 PDYNP01213 254 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 RPLP0P05388 317 aaKnown RBP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 TIE1P35590 1138 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF554Q86TJ5 538 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 KRTCAP2Q8N6L1 136 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CAMK1GQ96NX5 476 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 SMURF2Q9HAU4 748 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 DLGAP4Q9Y2H0 992 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 DUXAA6NLW8 204 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CD36P16671 472 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 SEPHS1P49903 392 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CMPK2Q5EBM0 449 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 C11orf88Q6PI97 169 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CEACAM20Q6UY09 585 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 TMEM145Q8NBT3 493 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 FIBINQ8TAL6 211 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 FAM110BQ8TC76 370 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 RBM18Q96H35 190 aaKnown RBP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 IL1RAPQ9NPH3 570 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 SDR39U1Q9NRG7 319 aaPredicted RBP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 LOC285095A0A1B0GVY8 99 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 TOR1BO14657 336 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 SLC22A1O15245 554 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 FAM131AQ6UXB0 335 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 FAR1Q8WVX9 515 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 SCRN2Q96FV2 425 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 KCNC2Q96PR1 638 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 HERC2P3Q9BVR0 1158 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 ADAP2Q9NPF8 381 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 SCN9AQ15858 1988 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 ABCA3Q99758 1704 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 PGRMC2O15173 223 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 KMOO15229 486 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 B3GALT2O43825 422 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 MAGP20916 626 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CST5P28325 142 aaPredicted RBP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CLK3P49761 638 aaKnown RBP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 CDKN1CP49918 316 aaPredicted RBP14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 HTR6P50406 440 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 ACVR1CQ8NER5 493 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 OR13J1Q8NGT2 312 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 NFKBIDQ8NI38 313 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 PKP4Q99569 1192 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 BOCQ9BWV1 1114 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 PEX16Q9Y5Y5 336 aa14.85□□□□□ -0.03
PCDHA3-202ENST00000532566 ECM29Q5VYK3 1845 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 EVPLQ92817 2033 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 EFCAB9A8MZ26 197 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 H0YJX3 145 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 BCHEP06276 602 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 C7P10643 843 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 AKT2P31751 481 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ERVPABLB-1P60509 514 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 IL18R1Q13478 541 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ANKRD26P1Q6NSI1 321 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 USP30Q70CQ3 517 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 OR4K1Q8NGD4 311 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ARRDC2Q8TBH0 407 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 CD200R1Q8TD46 325 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SIPA1Q96FS4 1042 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 TMEM98Q9Y2Y6 226 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 AGRPO00253 132 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SNPHO15079 494 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ALPPP05187 535 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 CAPN3P20807 821 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ITPKBP27987 946 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 CD70P32970 193 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 OR4D2P58180 307 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 GRSF1Q12849 480 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SYT16Q17RD7 645 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 TIGD6Q17RP2 521 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 CRB2Q5IJ48 1285 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF311Q5JNZ3 666 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF773Q6PK81 442 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ENPP7Q6UWV6 458 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 TSPAN33Q86UF1 283 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 COMMD2Q86X83 199 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 IZUMO1Q8IYV9 350 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 C9orf43Q8TAL5 461 aaPredicted RBP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 HTRA1Q92743 480 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 FCRL4Q96PJ5 515 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 TMEM9Q9P0T7 183 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 OAS3Q9Y6K5 1087 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 NME4O00746 187 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SNAP29O95721 258 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms