RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZNF480Q8WV37 535 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 TCF12Q99081 682 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 SH3BGRL2Q9UJC5 107 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 DRG1Q9Y295 367 aaKnown RBP17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 ANKRD17O75179 2603 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 E7ENX8 843 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 SMAPO00193 183 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 AP3B1O00203 1094 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 PFDN6O15212 129 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 WISP2O76076 250 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 SEC24DO94855 1032 aaPredicted RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 CCNDBP1O95273 360 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 RASAL1O95294 804 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 SYF2O95926 243 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 PKMP14618 531 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 OGNP20774 298 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 CLCN7P51798 805 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 ADARP55265 1226 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 TAP2Q03519 686 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF33BQ06732 778 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 KIAA0930Q6ICG6 404 aaPredicted RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 DRICH1Q6PGQ1 229 aaPredicted RBP17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 TMEM207Q6UWW9 146 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 LANCL3Q6ZV70 420 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 PRSS41Q7RTY9 318 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 CILP2Q8IUL8 1156 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 OR9A4Q8NGU2 314 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 CCDC120Q96HB5 630 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 IMMP1LQ96LU5 166 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 ABI3Q9P2A4 366 aa17.45■□□□□ 0.38
SSSCA1-206ENST00000531405 OR5H15A6NDH6 313 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 CCL21O00585 134 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 PRAMEF2O60811 474 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 C8orf89P0DMQ9 161 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 TPSB2P20231 275 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 ELAVL4P26378 380 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 ST13P50502 369 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 TRIP13Q15645 432 aaPredicted RBP17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 TPSAB1Q15661 275 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 MFSD4BQ5TF39 518 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 ABHD17BQ5VST6 288 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 FCRLBQ6BAA4 426 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 C4orf22Q6V702 233 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 TUBB6Q9BUF5 446 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 VN1R1Q9GZP7 353 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 RNF32Q9H0A6 362 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 UTP6Q9NYH9 597 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 STMN3Q9NZ72 180 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 SEC14L3Q9UDX4 400 aa17.44■□□□□ 0.38
SSSCA1-206ENST00000531405 OR2W5A6NFC9 320 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 A8MUI8 341 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 H7BY64 318 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 CRYABP02511 175 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 FGGP02679 453 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 SNRPB2P08579 225 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 POU3F2P20265 443 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 HSD17B2P37059 387 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 AVPR1BP47901 424 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 VPS41P49754 854 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 ART3Q13508 389 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 FAM53BQ14153 422 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 THEMIS2Q5TEJ8 643 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF470Q6ECI4 717 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 NEPROQ6NW34 567 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 CASC4Q6P4E1 433 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 MRGPRGQ86SM5 289 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 LRRC56Q8IYG6 542 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 PRELID2Q8N945 189 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 SUN3Q8TAQ9 357 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 MOCOSQ96EN8 888 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 PRAP1Q96NZ9 151 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 MACROD1Q9BQ69 325 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 TSGA10Q9BZW7 698 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 FBXO6Q9NRD1 293 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 SUCOQ9UBS9 1254 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 MED16Q9Y2X0 877 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 F8P00451 2351 aa17.43■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF839A8K0R7 811 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 TXNDC9O14530 226 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 ICAM2P13598 275 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 CA7P43166 264 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 ABATP80404 500 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 CDK16Q00536 496 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 CTBP1Q13363 440 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 NDUFA9Q16795 377 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 MINDY4Q4G0A6 757 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 ANKRD22Q5VYY1 191 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF549Q6P9A3 640 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 VN1R4Q7Z5H5 301 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 DENND6AQ8IWF6 608 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 DNAJB8Q8NHS0 232 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 METTL21AQ8WXB1 218 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 ASB11Q8WXH4 323 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 PHF12Q96QT6 1004 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 CYTH2Q99418 400 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 INTS10Q9NVR2 710 aaKnown RBP17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 HCN3Q9P1Z3 774 aa17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 KLF2Q9Y5W3 355 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-206ENST00000531405 CCDC168Q8NDH2 2452 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 CTAGE9A4FU28 777 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms