RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 SKIV2L2P42285 1042 aaKnown RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 AP2B1P63010 937 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 SNRPNP63162 240 aaKnown RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 CCZ1BP86790 482 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 CCZ1P86791 482 aaPredicted RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 GPS1Q13098 491 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 CUL1Q13616 776 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 DHX34Q14147 1143 aaKnown RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 TRIP13Q15645 432 aaPredicted RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 SYT16Q17RD7 645 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 ANKRD22Q5VYY1 191 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 FAAH2Q6GMR7 532 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 CASC4Q6P4E1 433 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 ZNF549Q6P9A3 640 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 CYHR1Q6ZMK1 362 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 RELTQ969Z4 430 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 ZNF669Q96BR6 464 aaPredicted RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 IMMP1LQ96LU5 166 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 MAGEB10Q96LZ2 347 aaPredicted RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 EBNA1BP2Q99848 306 aaKnown RBP10.76□□□□□ -0.69
VPS28-214ENST00000531032 TUBB6Q9BUF5 446 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 SAMD15Q9P1V8 674 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 MKL2Q9ULH7 1088 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 ENTPD4Q9Y227 616 aa10.76□□□□□ -0.69
VPS28-214ENST00000531032 CSMD1Q96PZ7 3565 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 MAGEB16A2A368 324 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 CTAGE9A4FU28 777 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 SDR42E2A6NKP2 422 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 H0YIG0 161 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 WFS1O76024 890 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 WDPCPO95876 746 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 SYF2O95926 243 aaKnown RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 F7P08709 466 aaPredicted RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 C8orf89P0DMQ9 161 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 ITGAMP11215 1152 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 ICAM2P13598 275 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 IMPA1P29218 277 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 CXCR5P32302 372 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 SLC1A2P43004 574 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 VPS41P49754 854 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 TERF1P54274 439 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 KCNK10P57789 538 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 MAT1AQ00266 395 aaKnown RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 CTBP1Q13363 440 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 NDUFA9Q16795 377 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 HIBCHQ6NVY1 386 aaPredicted RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 VN1R4Q7Z5H5 301 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 ADCK2Q7Z695 626 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 FJX1Q86VR8 437 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 SPNS2Q8IVW8 549 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 MCUQ8NE86 351 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 CD200R1Q8TD46 325 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 ANP32BQ92688 251 aaKnown RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 VN1R1Q9GZP7 353 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 CCDC68Q9H2F9 335 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 XAB2Q9HCS7 855 aaKnown RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 FBXO6Q9NRD1 293 aaPredicted RBP10.75□□□□□ -0.69
VPS28-214ENST00000531032 ABI3Q9P2A4 366 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 PPP2R2CQ9Y2T4 447 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 DHRS7Q9Y394 339 aa10.75□□□□□ -0.69
VPS28-214ENST00000531032 KCNE1BA0A087WTH5 132 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 OR5H15A6NDH6 313 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 H7BY64 318 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 EIF3FO00303 357 aaPredicted RBP10.74□□□□□ -0.69
VPS28-214ENST00000531032 ZBTB14O43829 449 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 KIF5CO60282 957 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 NSA2O95478 260 aaKnown RBP10.74□□□□□ -0.69
VPS28-214ENST00000531032 F10P00742 488 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 CRYABP02511 175 aaKnown RBP10.74□□□□□ -0.69
VPS28-214ENST00000531032 KRT14P02533 472 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 UQCRHP07919 91 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 HRH2P25021 359 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 TNFRSF8P28908 595 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 MAGEA3P43357 314 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 AVPR1BP47901 424 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 THOC5Q13769 683 aaKnown RBP10.74□□□□□ -0.69
VPS28-214ENST00000531032 THEMIS2Q5TEJ8 643 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 ABHD17BQ5VST6 288 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 TTC27Q6P3X3 843 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 PLD3Q8IV08 490 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 LMNTD2Q8IXW0 634 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 AMER2Q8N7J2 671 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 OR9A4Q8NGU2 314 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 MARVELD3Q96A59 401 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 PRAP1Q96NZ9 151 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 SERPINB12Q96P63 405 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 GPR21Q99679 349 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.74□□□□□ -0.69
VPS28-214ENST00000531032 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 CCDC177Q9NQR7 707 aaPredicted RBP10.74□□□□□ -0.69
VPS28-214ENST00000531032 ABCF3Q9NUQ8 709 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 TMEM184CQ9NVA4 438 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 COMMD10Q9Y6G5 202 aa10.74□□□□□ -0.69
VPS28-214ENST00000531032 PRAMEF2O60811 474 aa10.73□□□□□ -0.69
VPS28-214ENST00000531032 RASAL1O95294 804 aa10.73□□□□□ -0.69
VPS28-214ENST00000531032 STATHP02808 62 aa10.73□□□□□ -0.69
VPS28-214ENST00000531032 PRF1P14222 555 aa10.73□□□□□ -0.69
VPS28-214ENST00000531032 MST1P26927 711 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms