RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SPESP1Q6UW49 350 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 ACAD11Q709F0 780 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 LAS2Q8IYD9 372 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 OR4K1Q8NGD4 311 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 OR2I1PQ8NGU4 316 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 OR10G6Q8NH81 332 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 WDR20Q8TBZ3 569 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 ACTRT2Q8TDY3 377 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 RSC1A1Q92681 617 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 TCEAL3Q969E4 200 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 FRG2BQ96QU4 278 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 SARGQ9BW04 601 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 TUBB1Q9H4B7 451 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 SMOC1Q9H4F8 434 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 ELOVL6Q9H5J4 265 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 SLC6A20Q9NP91 592 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 TMEM184CQ9NVA4 438 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 EVA1BQ9NVM1 165 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 RIC8BQ9NVN3 520 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 CUEDC1Q9NWM3 386 aaPredicted RBP12.56□□□□□ -0.4
CPNE3-205ENST00000522240 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
CPNE3-205ENST00000522240 LRIT1Q9P2V4 623 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 EPHA6Q9UF33 1036 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 PADI4Q9UM07 663 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 PPT2Q9UMR5 302 aa12.56□□□□□ -0.4
CPNE3-205ENST00000522240 IGKV1-8A0A0C4DH67 115 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 NPIPB8E9PQR5 432 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 SLC28A1O00337 649 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 FFAR3O14843 346 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 GPR42O15529 346 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 FLRT2O43155 660 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 ZW10O43264 779 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 TNFSF14O43557 240 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 SIGLEC6O43699 453 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 ULK1O75385 1050 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 AMD1P17707 334 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 VARSP26640 1264 aaKnown RBP12.55□□□□□ -0.4
CPNE3-205ENST00000522240 SERPINB3P29508 390 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 GRK6P43250 576 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 CSNK1G2P78368 415 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 PHEXP78562 749 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
CPNE3-205ENST00000522240 TRIM46Q7Z4K8 759 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 ZNF761Q86XN6 746 aaPredicted RBP12.55□□□□□ -0.4
CPNE3-205ENST00000522240 DDIASQ8IXT1 998 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 CARFQ8N187 725 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 GBP7Q8N8V2 638 aaPredicted RBP12.55□□□□□ -0.4
CPNE3-205ENST00000522240 TTLQ8NG68 377 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 SELENOMQ8WWX9 145 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 CCT6BQ92526 530 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 NAT6Q93015 286 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 APOLD1Q96LR9 279 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 CD180Q99467 661 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 EBF4Q9BQW3 602 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 TCF7L2Q9NQB0 619 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 HRASLS2Q9NWW9 162 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 ADGRE2Q9UHX3 823 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 U3KQA8 63 aa12.55□□□□□ -0.4
CPNE3-205ENST00000522240 PCM1Q15154 2024 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 IGHV1OR21-1A0A087WYE8 117 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 TRBC2A0A5B9 178 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 OR2A25A4D2G3 310 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 EME2A4GXA9 379 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-205ENST00000522240 FOXE1O00358 373 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-205ENST00000522240 DUX1O43812 170 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 DCTN3O75935 186 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 PRR35P0CG20 571 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 EPHA3P29320 983 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 GRK3P35626 688 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 PIK3CBP42338 1070 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 IRX1P78414 480 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-205ENST00000522240 RELAQ04206 551 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 TUBB3Q13509 450 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 ABRAXAS2Q15018 415 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 SMU1Q2TAY7 513 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 VWA5B1Q5TIE3 1220 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 KIAA1614Q5VZ46 1190 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 METTL21CQ5VZV1 264 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 OGFOD2Q6N063 350 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 TMIGD1Q6UXZ0 262 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 PAQR7Q86WK9 346 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 TBC1D19Q8N5T2 526 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 EID2Q8N6I1 236 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 OR7G3Q8NG95 312 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 CEP70Q8NHQ1 597 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 SPNS1Q9H2V7 528 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 RHBGQ9H310 441 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 DLL3Q9NYJ7 618 aa12.54□□□□□ -0.4
CPNE3-205ENST00000522240 ZNF490Q9ULM2 529 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-205ENST00000522240 ARID1BQ8NFD5 2236 aaPredicted RBP12.53□□□□□ -0.4
CPNE3-205ENST00000522240 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
CPNE3-205ENST00000522240 H7BY64 318 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms