RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ULBP1Q9BZM6 244 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 POMKQ9H5K3 350 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GAREM1Q9H706 876 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SYNCQ9H7C4 482 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NHEJ1Q9H9Q4 299 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TCF7L2Q9NQB0 619 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SEPT11Q9NVA2 429 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CLIC5Q9NZA1 410 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GDE1Q9NZC3 331 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SMARCAL1Q9NZC9 954 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 WDR35Q9P2L0 1181 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 THEGQ9P2T0 379 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CDH7Q9ULB5 785 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NENFQ9UMX5 172 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM98Q9Y2Y6 226 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ZFP37Q9Y6Q3 630 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ATXN2Q99700 1313 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GOLGA6L10A0A0M3HER8 536 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TTC36A6NLP5 189 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 SIGLEC16A6NMB1 481 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 YJEFN3A6XGL0 299 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TMCO5BA8MYB1 307 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 C2CD4DB7Z1M9 353 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 E7ENQ6 273 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ANHXE9PGG2 379 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 COCHO43405 550 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CEP104O60308 925 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 HSF2BPO75031 334 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ECI2O75521 394 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 OLFM2O95897 454 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 OAS1P00973 400 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CALB1P05937 261 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 FYNP06241 537 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 H2AFZP0C0S5 128 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 MYBL1P10243 752 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 RARGP13631 454 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 IL9P15248 144 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CEBPBP17676 345 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ATP5C1P36542 298 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ARL1P40616 181 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 GALCP54803 685 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 GSCP56915 257 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 RPP30P78346 268 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 SLC7A9P82251 487 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 GFPT1Q06210 699 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PTP4A2Q12974 167 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ITGADQ13349 1161 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 MAMLD1Q13495 774 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 SPA17Q15506 151 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 FBXO43Q4G163 708 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PTPN20Q4JDL3 420 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 FAM76BQ5HYJ3 339 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 FAM78AQ5JUQ0 283 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 C10orf120Q5SQS8 335 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC122Q5T0U0 273 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 OTUD3Q5T2D3 398 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 STXBP5Q5T5C0 1151 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TXNDC8Q6A555 127 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PLEKHA7Q6IQ23 1121 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ALKBH5Q6P6C2 394 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 FAM183BPQ6ZVS7 135 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 H2AFVQ71UI9 128 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 RSRC2Q7L4I2 434 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 SLC26A9Q7LBE3 791 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ARCQ7LC44 396 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 MAATS1Q7Z4T9 603 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PHLDB2Q86SQ0 1253 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF329Q86UD4 541 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TBC1D26Q86UD7 250 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ARID3BQ8IVW6 561 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC170Q8IYT3 715 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CMTM8Q8IZV2 173 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 DEFB106AQ8N104 65 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PGBD5Q8N414 524 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 MAB21L3Q8N8X9 362 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 LMNTD1Q8N9Z9 388 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TDRD5Q8NAT2 981 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 RNF139Q8WU17 664 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ING5Q8WYH8 240 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 SMARCD2Q92925 531 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ELSPBP1Q96BH3 223 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 SCMH1Q96GD3 660 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 FEM1CQ96JP0 617 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 RPGRIP1Q96KN7 1286 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC42Q96M95 316 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CYP2S1Q96SQ9 504 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 BAG1Q99933 345 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 C11orf70Q9BRQ4 267 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 NMUR1Q9HB89 426 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TRPV4Q9HBA0 871 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ZFP14Q9HCL3 533 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PREBQ9HCU5 417 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 TRPC7Q9HCX4 862 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CYSLTR2Q9NS75 346 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ABCC13Q9NSE7 274 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 OLA1Q9NTK5 396 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PARVAQ9NVD7 372 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 OSER1Q9NX31 292 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 PPP1R14DQ9NXH3 145 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms